FFCP PHASE1:Hg19::chr5:149782716..149782733,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1697 | |||
|TSSclassifier=strong | |||
|UniProt=O78208 | |||
|association_with_transcript=141bp_to_M28590_5end | |||
|cluster_id=chr5:149782716..149782733,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_6_at_CD74_5end | |||
|id=chr5:149782716..149782733,- | |||
|ontology_enrichment_celltype=CL:0002087!8.55e-46!119;CL:0000738!9.81e-46!140;CL:0002031!2.72e-43!124;CL:0002009!2.10e-42!65;CL:0002194!4.95e-40!63;CL:0000576!4.95e-40!63;CL:0000040!4.95e-40!63;CL:0000559!4.95e-40!63;CL:0000557!4.62e-37!71;CL:0002057!6.89e-36!42;CL:0000839!4.83e-34!70;CL:0000037!5.10e-33!172;CL:0000566!5.10e-33!172;CL:0000860!1.92e-32!45;CL:0002032!1.45e-31!165;CL:0000837!1.45e-31!165;CL:0000766!3.07e-31!76;CL:0000988!4.29e-31!182;CL:0000763!2.85e-22!112;CL:0000049!2.85e-22!112;CL:0000451!3.60e-13!10;CL:0000990!6.39e-12!8;CL:0000838!5.52e-09!52;CL:0000542!1.16e-08!53;CL:0000051!1.16e-08!53;CL:0000840!3.13e-08!5;CL:0001029!3.13e-08!5;CL:0000453!9.41e-08!5;CL:0000945!4.27e-07!24;CL:0000826!4.27e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.62e-54;39!CL:0000234;4.62e-54;39!CL:0000860;9.00e-52;33!CL:0002057;9.00e-52;33!CL:0000990;5.05e-28;8!CL:0000576;7.41e-27;48!CL:0000451;1.15e-22;10!CL:0000453;6.72e-21;5!CL:0000766;1.31e-19;69!CL:0000840;1.02e-16;5!CL:0000235;6.54e-16;6!CL:0000738;7.24e-12;136!CL:0002087;3.20e-10;104!CL:0001014;2.69e-09;2!CL:0001016;2.69e-09;2!CL:0000763;2.91e-09;100!CL:0000988;1.15e-07;177!CL:0000236;7.66e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.73e-67,61;CL:0002194,2.57e-61,59;CL:0000576,2.57e-61,59;CL:0000040,2.57e-61,59;CL:0000559,2.57e-61,59;CL:0000557,8.97e-61,67;CL:0000473,3.87e-59,48;CL:0000234,3.87e-59,48;CL:0000839,4.73e-54,66;CL:0000766,6.21e-49,72;CL:0000860,6.45e-46,42;CL:0002057,6.45e-46,42;CL:0000738,1.19e-44,136;CL:0002031,1.12e-43,120;CL:0000763,2.49e-42,108;CL:0000049,2.49e-42,108;CL:0002087,9.77e-41,115;CL:0002032,3.12e-36,161;CL:0000837,3.12e-36,161;CL:0000037,2.54e-34,168;CL:0000988,4.39e-32,177;CL:0000990,2.58e-28,8;CL:0000451,6.70e-23,10;CL:0000453,6.71e-21,5;CL:0000840,5.44e-17,5;CL:0001029,5.44e-17,5;CL:0000235,1.29e-15,6;CL:0000134,3.84e-11,354;CL:0002320,9.77e-11,361;CL:0000219,2.61e-09,386;CL:0001014,2.66e-09,2;CL:0001016,2.66e-09,2;CL:0000048,1.42e-07,427;CL:0000723,2.46e-07,433;CL:0000034,5.01e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-36;42!CL:0000049;2.82e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.01e-32!102;UBERON:0003061!1.01e-32!102;UBERON:0002371!9.83e-32!80;UBERON:0002193!4.25e-30!112;UBERON:0001474!4.22e-28!86;UBERON:0007023!1.60e-25!115;UBERON:0002405!1.65e-25!115;UBERON:0004765!5.19e-21!101;UBERON:0001434!5.19e-21!101;UBERON:0003081!1.74e-09!216;UBERON:0002204!1.51e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-52,76;UBERON:0001474,3.09e-48,82;UBERON:0004765,3.06e-43,90;UBERON:0002405,1.38e-41,93;UBERON:0002390,1.71e-41,98;UBERON:0003061,1.71e-41,98;UBERON:0001434,4.14e-38,100;UBERON:0002193,6.96e-37,108;UBERON:0002204,1.61e-19,167;UBERON:0003081,5.01e-18,203;UBERON:0002384,5.89e-11,371;UBERON:0000926,1.52e-08,315;UBERON:0004120,1.52e-08,315;UBERON:0006603,1.52e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.61130724598361,0.656804715599566,0.550975469195755,0,0,0.619264493264304,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.601633342410425,0.434021741431704,0.671746422719773,0.971680998056939,2.31818010870768,0.581592955118259,1.88937971844405,1.21292030593908,1.39457422143411,3.28934310417461,1.85823822537062,1.7261543539329,1.5369642391746,1.41889337933151,1.72372840368309,1.29096936716765,0,1.88242339542605,1.91034305040492,1.34834090667051,0.918251677112708,0.962787081228281,1.91801137739712,0.329851300186716,2.19410023383795,3.40979800426155,1.45104619314292,1.70215567407342,3.11411124497787,2.26123798731069,0,1.73751075764093,1.81619850790011,1.47311054395026,0.632924774881769,0.633765858935825,1.27562579979026,0.838634582033504,0.786300418025466,0.750884464207532,0.64290234678832,0.570025487482497,0,0.365328307529268,0,0,0.889509253863555,0.853460445133014,0,1.14950487990897,1.98313461835459,0,1.1384259382189,1.76171156811282,1.14681968437569,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0.150575119077773,0,0,0.473554504088034,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,1.9472843619281,3.48259474598534,6.51494006542439,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.936017060556951,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,6.32501818449095,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,2.22886768554957,0,0,0.296964680832639,0,0,0.281338832821026,0,0.16480387422676,0,0.796991953004279,0.276283915531148,0,0,0.615424027305347,0,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0.247127877893006,0.104421949505455,0.202203398942031,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.85381197895741,0,0,0,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0,0,0.599037001496973,0.429226048136571,0,0,0,0,0,0.0824158583811665,0,0,0,0,0.272406812223151,0,0,0,4.49947783103001,5.41661368190565,0.121499113316049,0,0.945668487590378,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0,0,0.427149650270779,0.314408610199332,4.14239055347196,0.992332043623902,0,0.60896299190448,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0.138258436151731,15.1991040894723,8.76907946068197,8.66896589555974,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.798169295285756,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.992422356778588,0,0,0,0,1.21393120847326,0,0.266107110487916,0.460935950223117,0,0.135939465953663,0.0657727735628491,0,0,0.39246546425257,0,0,0,0,0.47775168788705,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.294450700845729,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,1.09279780251979,0,0,0,0.196308467114945,0.891139200981258,0,0,0.657887425858975,0.386747327841463,0,0,0,0,0,0.917458566809082,0.430018749454354,0,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0,0.517164979309476,1.49263787330687,0,0.645889098360061,0.31037357147929,0,0.12729431655633,0,0.435433495793923,0,0.5388164241167,0.215166616178029,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0.665756774185513,1.20764276154616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| |||
|short_description=p6@CD74 | |||
}} |
Latest revision as of 04:30, 16 September 2015
Short description: | p6@CD74 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CD74_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | 141bp_to_M28590_5end |
EntrezGene: | CD74 |
HGNC: | 1697 |
UniProt: | O78208 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-52 | 76 |
bone element | 3.09e-48 | 82 |
skeletal element | 3.06e-43 | 90 |
immune system | 1.38e-41 | 93 |
hematopoietic system | 1.71e-41 | 98 |
blood island | 1.71e-41 | 98 |
skeletal system | 4.14e-38 | 100 |
hemolymphoid system | 6.96e-37 | 108 |
musculoskeletal system | 1.61e-19 | 167 |
lateral plate mesoderm | 5.01e-18 | 203 |
connective tissue | 5.89e-11 | 371 |
mesoderm | 1.52e-08 | 315 |
mesoderm-derived structure | 1.52e-08 | 315 |
presumptive mesoderm | 1.52e-08 | 315 |