FFCP PHASE1:Hg19::chr1:228786346..228786350,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:228786346..228786350,+
|short_description=p3@DUSP5P
|description=CAGE_peak_3_at_DUSP5P_5end
|association_with_transcript=358bp_to_ENST00000441325_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32020 | |HGNC=32020 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=358bp_to_ENST00000441325_5end | |||
|cluster_id=chr1:228786346..228786350,+ | |||
|description=CAGE_peak_3_at_DUSP5P_5end | |||
|id=chr1:228786346..228786350,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002551;1.48e-10;6!CL:0002328;3.98e-10;3!CL:0000784;7.82e-10;3!CL:0002591;5.39e-08;1!CL:0002379;5.39e-08;1!CL:1000449;1.73e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002551,1.43e-10,6;CL:0002328,4.18e-10,3;CL:0000784,1.22e-09,3;CL:0002379,2.71e-08,1;CL:0002591,8.12e-08,1;CL:1000449,1.40e-07,15;CL:1000507,9.45e-07,10;CL:1000494,9.45e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;5.39e-08;1!DOID:3111;5.39e-08;1!DOID:3565;5.39e-08;1!DOID:3603;5.39e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.71e-08,1;DOID:3565,2.71e-08,1;DOID:3111,4.71e-08,1;DOID:3603,4.71e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.98e-10;3!UBERON:0002031;3.98e-10;3!UBERON:0006555;1.73e-07;15!UBERON:0004819;1.73e-07;15!UBERON:0001285;1.73e-07;15!UBERON:0007684;1.73e-07;15!UBERON:0002067;3.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.18e-10,3;UBERON:0002031,4.18e-10,3;UBERON:0004211,1.40e-07,15;UBERON:0009773,1.40e-07,15;UBERON:0001231,1.40e-07,15;UBERON:0001285,1.40e-07,15;UBERON:0007684,1.40e-07,15;UBERON:0004208,1.40e-07,15;UBERON:0000485,2.88e-07,9;UBERON:0002067,3.35e-07,9;UBERON:0004016,3.35e-07,9;UBERON:0010083,3.35e-07,9;UBERON:0006555,4.13e-07,16;UBERON:0004819,4.13e-07,16;UBERON:0004810,9.45e-07,10 | |||
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| ||
|short_description=p3@DUSP5P | |||
}} | }} |
Latest revision as of 04:26, 16 September 2015
Short description: | p3@DUSP5P |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DUSP5P_5end |
Coexpression cluster: | NA |
Association with transcript: | 358bp_to_ENST00000441325_5end |
EntrezGene: | NA |
HGNC: | 32020 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of dermis | 1.43e-10 | 6 |
bronchial epithelial cell | 4.18e-10 | 3 |
plasmacytoid dendritic cell | 1.22e-09 | 3 |
meningothelial cell | 2.71e-08 | 1 |
smooth muscle cell of the pulmonary artery | 8.12e-08 | 1 |
epithelial cell of nephron | 1.40e-07 | 15 |
kidney tubule cell | 9.45e-07 | 10 |
nephron tubule epithelial cell | 9.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.18e-10 | 3 |
epithelium of bronchus | 4.18e-10 | 3 |
nephron epithelium | 1.40e-07 | 15 |
renal tubule | 1.40e-07 | 15 |
nephron tubule | 1.40e-07 | 15 |
nephron | 1.40e-07 | 15 |
uriniferous tubule | 1.40e-07 | 15 |
nephrogenic mesenchyme | 1.40e-07 | 15 |
simple columnar epithelium | 2.88e-07 | 9 |
dermis | 3.35e-07 | 9 |
dermatome | 3.35e-07 | 9 |
future dermis | 3.35e-07 | 9 |
excretory tube | 4.13e-07 | 16 |
kidney epithelium | 4.13e-07 | 16 |
nephron tubule epithelium | 9.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.71e-08 | 1 |
meningioma | 2.71e-08 | 1 |
cystadenocarcinoma | 4.71e-08 | 1 |
mucinous cystadenocarcinoma | 4.71e-08 | 1 |