FFCP PHASE1:Hg19::chr20:3762087..3762100,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25876 | |EntrezGene=25876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15874 | |HGNC=15874 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y4P9 | |UniProt=Q9Y4P9 | ||
|association_with_transcript=0bp_to_ENST00000379756,ENST00000463490,ENST00000471499_5end | |association_with_transcript=0bp_to_ENST00000379756,ENST00000463490,ENST00000471499_5end | ||
|cluster_id=chr20:3762087..3762100,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_1_at_SPEF1_5end | |description=CAGE_peak_1_at_SPEF1_5end | ||
|id=chr20:3762087..3762100,- | |id=chr20:3762087..3762100,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.25e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.45e-10!106;DOID:0050687!5.62e-09!143 | |ontology_enrichment_disease=DOID:305!1.45e-10!106;DOID:0050687!5.62e-09!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001896;5.00e-18;3!UBERON:0005290;5.00e-18;3!UBERON:0000125;1.20e-15;9!UBERON:0002308;1.20e-15;9!UBERON:0002780;1.88e-15;41!UBERON:0001890;1.88e-15;41!UBERON:0002298;1.92e-15;6!UBERON:0003528;4.16e-15;34!UBERON:0002020;4.16e-15;34!UBERON:0001869;7.90e-15;32!UBERON:0002791;8.11e-15;32!UBERON:0001893;3.22e-14;34!UBERON:0000369;8.57e-14;4!UBERON:0002435;8.57e-14;4!UBERON:0000204;8.57e-14;4!UBERON:0000073;1.93e-13;53!UBERON:0002616;1.93e-13;53!UBERON:0009663;2.32e-13;7!UBERON:0002420;2.04e-10;9!UBERON:0007245;2.04e-10;9!UBERON:0010009;2.04e-10;9!UBERON:0010011;2.04e-10;9!UBERON:0000454;2.04e-10;9!UBERON:0001017;9.43e-10;75!UBERON:0005383;7.77e-09;3!UBERON:0005382;7.77e-09;3!UBERON:0000955;8.44e-09;68!UBERON:0002619;5.44e-08;22!UBERON:0004733;9.01e-08;12!UBERON:0002028;9.01e-08;12!UBERON:0007023;1.84e-07;114!UBERON:0001874;2.99e-07;1!UBERON:0004732;3.53e-07;13!UBERON:0001882;4.25e-07;1!UBERON:0001301;4.25e-07;1!UBERON:0002171;4.25e-07;1!UBERON:0006518;4.25e-07;1!UBERON:0008949;4.25e-07;1!UBERON:0000101;4.25e-07;1!UBERON:0005403;4.25e-07;1!UBERON:0002167;4.25e-07;1!UBERON:0000956;5.26e-07;25!UBERON:0000203;5.26e-07;25!UBERON:0002336;9.23e-07;1!UBERON:0005795;9.23e-07;1!UBERON:0011215;9.23e-07;1!UBERON:0001018;9.23e-07;1!UBERON:0002473;9.23e-07;1!UBERON:0005340;9.23e-07;1!UBERON:0003544;9.23e-07;1!UBERON:0005970;9.23e-07;1!UBERON:0002316;9.23e-07;1!UBERON:0001020;9.23e-07;1!UBERON:0002437;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.36e-23,53;UBERON:0002616,5.36e-23,53;UBERON:0001049,1.32e-21,56;UBERON:0005068,1.32e-21,56;UBERON:0006241,1.32e-21,56;UBERON:0007135,1.32e-21,56;UBERON:0007023,3.36e-21,114;UBERON:0001896,3.88e-18,3;UBERON:0005290,3.88e-18,3;UBERON:0010096,3.88e-18,3;UBERON:0000955,5.83e-17,68;UBERON:0006238,5.83e-17,68;UBERON:0003528,5.84e-17,34;UBERON:0002020,5.84e-17,34;UBERON:0001893,5.93e-17,34;UBERON:0002780,1.47e-16,41;UBERON:0001890,1.47e-16,41;UBERON:0003080,1.47e-16,41;UBERON:0006240,1.47e-16,41;UBERON:0001017,9.34e-16,81;UBERON:0001016,1.05e-15,89;UBERON:0002298,1.19e-15,6;UBERON:0000125,1.28e-15,9;UBERON:0002308,1.28e-15,9;UBERON:0002791,6.99e-15,32;UBERON:0001869,6.99e-15,32;UBERON:0003075,8.96e-14,82;UBERON:0007284,8.96e-14,82;UBERON:0000369,1.02e-13,4;UBERON:0002435,1.02e-13,4;UBERON:0000204,1.02e-13,4;UBERON:0010082,1.02e-13,4;UBERON:0009663,3.25e-13,7;UBERON:0002346,5.50e-13,86;UBERON:0003056,1.81e-10,61;UBERON:0002420,2.64e-10,9;UBERON:0007245,2.64e-10,9;UBERON:0010009,2.64e-10,9;UBERON:0010011,2.64e-10,9;UBERON:0000454,2.64e-10,9;UBERON:0010371,3.44e-10,104;UBERON:0000025,2.48e-09,192;UBERON:0005383,8.09e-09,3;UBERON:0005382,8.09e-09,3;UBERON:0010314,1.90e-08,132;UBERON:0011216,3.62e-08,223;UBERON:0002619,6.06e-08,22;UBERON:0004733,7.14e-08,12;UBERON:0002028,7.14e-08,12;UBERON:0007277,7.14e-08,12;UBERON:0001874,2.82e-07,1;UBERON:0004732,2.86e-07,13;UBERON:0001301,4.25e-07,1;UBERON:0002171,4.78e-07,1;UBERON:0006518,4.78e-07,1;UBERON:0008949,4.78e-07,1;UBERON:0000101,4.78e-07,1;UBERON:0002167,4.78e-07,1;UBERON:0001882,5.06e-07,1;UBERON:0005403,5.06e-07,1;UBERON:0000956,5.78e-07,25;UBERON:0000203,5.78e-07,25;UBERON:0002336,6.02e-07,1;UBERON:0011215,6.02e-07,1;UBERON:0001018,6.02e-07,1;UBERON:0002473,6.02e-07,1;UBERON:0005340,6.02e-07,1;UBERON:0003544,6.02e-07,1;UBERON:0005970,6.02e-07,1;UBERON:0002316,6.02e-07,1;UBERON:0001020,6.02e-07,1;UBERON:0002437,6.02e-07,1 | |||
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| ||
|short_description=p1@SPEF1 | |short_description=p1@SPEF1 | ||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p1@SPEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPEF1_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 0bp_to_ENST00000379756, ENST00000463490, ENST00000471499_5end |
EntrezGene: | SPEF1 |
HGNC: | 15874 |
UniProt: | Q9Y4P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data