FFCP PHASE1:Hg19::chr11:119599869..119599934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5818 | |EntrezGene=5818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9706 | |HGNC=9706 | ||
|TSSclassifier=strong | |||
|UniProt=Q15223 | |UniProt=Q15223 | ||
|association_with_transcript=-75bp_to_ENST00000264025_5end | |association_with_transcript=-75bp_to_ENST00000264025_5end | ||
|cluster_id=chr11:119599869..119599934,- | |||
|coexpression_cluster_id=C3096 | |||
|description=CAGE_peak_1_at_PVRL1_5end | |description=CAGE_peak_1_at_PVRL1_5end | ||
|id=chr11:119599869..119599934,- | |id=chr11:119599869..119599934,- | ||
|ontology_enrichment_celltype=CL:0000066!2.33e-12!254;CL:0002076!5.03e-12!43;CL:0000223!5.72e-12!59;CL:0002251!5.00e-08!21 | |ontology_enrichment_celltype=CL:0000066!2.33e-12!254;CL:0002076!5.03e-12!43;CL:0000223!5.72e-12!59;CL:0002251!5.00e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.27e-10;42!CL:0002251;7.23e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.27e-13,42;CL:0000066,1.45e-12,253;CL:0000223,1.46e-12,58;CL:0002251,6.48e-09,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.92e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!3.81e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.62e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.76e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.54e-19!57;UBERON:0005068!6.54e-19!57;UBERON:0006241!6.54e-19!57;UBERON:0007135!6.54e-19!57;UBERON:0004121!1.52e-18!169;UBERON:0001017!9.15e-18!82;UBERON:0005743!2.02e-17!86;UBERON:0000924!7.70e-17!173;UBERON:0006601!7.70e-17!173;UBERON:0000073!3.72e-16!94;UBERON:0001016!3.72e-16!94;UBERON:0000153!7.61e-16!129;UBERON:0007811!7.61e-16!129;UBERON:0000033!7.68e-16!123;UBERON:0007023!3.16e-15!115;UBERON:0003080!6.31e-15!42;UBERON:0002780!1.00e-14!41;UBERON:0001890!1.00e-14!41;UBERON:0006240!1.00e-14!41;UBERON:0000955!1.29e-14!69;UBERON:0006238!1.29e-14!69;UBERON:0003075!4.45e-14!86;UBERON:0007284!4.45e-14!86;UBERON:0002616!6.43e-14!59;UBERON:0000922!3.29e-13!612;UBERON:0001893!3.35e-13!34;UBERON:0004111!3.94e-13!241;UBERON:0002020!5.73e-13!34;UBERON:0003528!5.73e-13!34;UBERON:0002791!1.07e-12!33;UBERON:0001869!4.07e-12!32;UBERON:0002346!4.98e-12!90;UBERON:0003056!3.13e-11!61;UBERON:0002050!3.48e-11!605;UBERON:0005423!3.48e-11!605;UBERON:0000923!6.32e-11!604;UBERON:0005291!6.32e-11!604;UBERON:0006598!6.32e-11!604;UBERON:0002532!6.32e-11!604;UBERON:0002619!1.16e-10!22;UBERON:0000480!4.12e-10!626;UBERON:0000467!5.49e-10!625;UBERON:0000025!6.28e-10!194;UBERON:0000956!7.00e-10!25;UBERON:0000203!7.00e-10!25;UBERON:0001950!7.80e-10!20;UBERON:0000468!3.67e-09!659;UBERON:0000483!8.40e-09!309;UBERON:0000062!8.50e-09!511;UBERON:0000064!8.95e-09!219;UBERON:0000119!9.52e-09!312;UBERON:0004119!2.24e-08!169;UBERON:0000925!2.24e-08!169;UBERON:0006595!2.24e-08!169;UBERON:0000477!3.36e-08!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.49e-11;34!UBERON:0003528;4.69e-11;34!UBERON:0002020;4.69e-11;34!UBERON:0001869;5.18e-11;32!UBERON:0002791;5.67e-11;32!UBERON:0002780;7.11e-11;41!UBERON:0001890;7.11e-11;41!UBERON:0002619;9.96e-11;22!UBERON:0000073;2.14e-10;53!UBERON:0002616;2.14e-10;53!UBERON:0000956;6.45e-10;25!UBERON:0000203;6.45e-10;25!UBERON:0001950;6.77e-10;20!UBERON:0000955;7.04e-07;68!UBERON:0001017;7.54e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.03e-18,56;UBERON:0005068,1.03e-18,56;UBERON:0006241,1.03e-18,56;UBERON:0007135,1.03e-18,56;UBERON:0001017,1.49e-17,81;UBERON:0000073,2.00e-17,53;UBERON:0002616,2.00e-17,53;UBERON:0010371,2.20e-17,104;UBERON:0011216,2.38e-17,223;UBERON:0001016,3.02e-16,89;UBERON:0004121,3.39e-16,171;UBERON:0000924,3.39e-16,171;UBERON:0006601,3.39e-16,171;UBERON:0007023,6.45e-15,114;UBERON:0002780,9.77e-15,41;UBERON:0001890,9.77e-15,41;UBERON:0003080,9.77e-15,41;UBERON:0006240,9.77e-15,41;UBERON:0000955,2.08e-14,68;UBERON:0006238,2.08e-14,68;UBERON:0003075,2.91e-14,82;UBERON:0007284,2.91e-14,82;UBERON:0000922,8.08e-14,592;UBERON:0001893,3.27e-13,34;UBERON:0003528,5.61e-13,34;UBERON:0002020,5.61e-13,34;UBERON:0004111,8.80e-13,240;UBERON:0005423,2.96e-12,581;UBERON:0002791,3.95e-12,32;UBERON:0001869,3.99e-12,32;UBERON:0002346,4.24e-12,86;UBERON:0002050,8.30e-12,564;UBERON:0003056,1.55e-11,61;UBERON:0000923,9.33e-11,560;UBERON:0010316,9.33e-11,560;UBERON:0005291,9.33e-11,560;UBERON:0006598,9.33e-11,560;UBERON:0010317,9.33e-11,560;UBERON:0002532,9.33e-11,560;UBERON:0002619,1.14e-10,22;UBERON:0000025,5.83e-10,192;UBERON:0000956,6.89e-10,25;UBERON:0000203,6.89e-10,25;UBERON:0001950,7.67e-10,20;UBERON:0004119,1.89e-08,160;UBERON:0000925,1.89e-08,160;UBERON:0006595,1.89e-08,160;UBERON:0000483,2.02e-08,306;UBERON:0000119,2.28e-08,309;UBERON:0010314,3.89e-08,132 | |||
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| ||
|short_description=p1@PVRL1 | |short_description=p1@PVRL1 | ||
}} | }} |
Latest revision as of 04:18, 16 September 2015
Short description: | p1@PVRL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PVRL1_5end |
Coexpression cluster: | C3096_Urothelial_Small_Corneal_Prostate_Esophageal_Bronchial_cervical |
Association with transcript: | -75bp_to_ENST00000264025_5end |
EntrezGene: | PVRL1 |
HGNC: | 9706 |
UniProt: | Q15223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.27e-13 | 42 |
epithelial cell | 1.45e-12 | 253 |
endodermal cell | 1.46e-12 | 58 |
epithelial cell of alimentary canal | 6.48e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.76e-07 | 14 |