FFCP PHASE1:Hg19::chr17:48821138..48821151,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:48821138..48821151,+
|short_description=p10@LUC7L3
|description=CAGE_peak_10_at_LUC7L3_5end
|association_with_transcript=105bp_to_ENST00000511068_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51747 | |EntrezGene=51747 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24309 | |HGNC=24309 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000511068_5end | |||
|cluster_id=chr17:48821138..48821151,+ | |||
|description=CAGE_peak_10_at_LUC7L3_5end | |||
|id=chr17:48821138..48821151,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.73e-11!235;DOID:14566!6.17e-11!239;DOID:0050687!7.88e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-08!57;UBERON:0005068!3.51e-08!57;UBERON:0006241!3.51e-08!57;UBERON:0007135!3.51e-08!57;UBERON:0000073!1.37e-07!94;UBERON:0001016!1.37e-07!94;UBERON:0002780!7.49e-07!41;UBERON:0001890!7.49e-07!41;UBERON:0006240!7.49e-07!41;UBERON:0001017!9.99e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.66e-08;34!UBERON:0002020;1.66e-08;34!UBERON:0000073;4.59e-08;53!UBERON:0002616;4.59e-08;53!UBERON:0001869;8.62e-08;32!UBERON:0002791;9.11e-08;32!UBERON:0002771;9.66e-08;2!UBERON:0001875;9.66e-08;2!UBERON:0006514;9.66e-08;2!UBERON:0001017;9.73e-08;75!UBERON:0002780;1.06e-07;41!UBERON:0001890;1.06e-07;41!UBERON:0001950;3.04e-07;20!UBERON:0001016;4.77e-07;83!UBERON:0001893;5.32e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.03e-15,56;UBERON:0005068,2.03e-15,56;UBERON:0006241,2.03e-15,56;UBERON:0007135,2.03e-15,56;UBERON:0001016,5.59e-13,89;UBERON:0000073,1.17e-12,53;UBERON:0002616,1.17e-12,53;UBERON:0001017,6.25e-12,81;UBERON:0002346,4.13e-11,86;UBERON:0003075,1.73e-10,82;UBERON:0007284,1.73e-10,82;UBERON:0000955,2.49e-10,68;UBERON:0006238,2.49e-10,68;UBERON:0003528,1.06e-09,34;UBERON:0002020,1.06e-09,34;UBERON:0002780,2.29e-09,41;UBERON:0001890,2.29e-09,41;UBERON:0003080,2.29e-09,41;UBERON:0006240,2.29e-09,41;UBERON:0002791,1.25e-08,32;UBERON:0001869,1.25e-08,32;UBERON:0007023,2.31e-08,114;UBERON:0010371,2.31e-08,104;UBERON:0001893,5.00e-08,34;UBERON:0002771,5.59e-08,2;UBERON:0001875,6.21e-08,2;UBERON:0006514,6.21e-08,2;UBERON:0003076,6.50e-08,15;UBERON:0003057,6.50e-08,15;UBERON:0011216,6.53e-08,223;UBERON:0010314,2.28e-07,132;UBERON:0001950,2.53e-07,20 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,1.34465029290355,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.502170558379211,0.229240217243854,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.387336002901508,1.27952309238679,0,0,0.200544447470142,0.217010870715852,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.334372990781356,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.566546713487831,0,0,0.506039384039006,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,4.87613732627923,0,0,0.361439152384566,0,0.869079113764942,0,0,0,0,0.43917392846563,0,0,0.370784442784429,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0.488124115096339,0.367663080345869,0,0.0892997282840798,0,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.662045904066094,0.860509862246441,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.747243402759005,0.23486899728753,0,0,0.204154171254893,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0.300476117813194,0,1.25572744982203,0,0.211931901159562,0.900273288253207,0.103052529238439,1.28820270022815,0.18611685633159,0.675105328965065,0,0.757301322732344,0.0920498986422993,0.161646056818812,1.06502877754984,0,0.169560592310488,0,0,0,0.365921118388786,0.265059536642971,0.232387885739037,0.10366105501537,0.756962552626885,1.45990943630332,0,0.643240938192885,0,0.464367928031979,0,0.828147600278907,0.505754070234305,1.68707720918437,0.220587945464788,0.435758888184812,0.474541238222193,0.404493924480493,1.17732879075208,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,0.737930631258681,0,0,0,0.904760751704678,0.185176890317059,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.148631162288728,0,0.671928512795438,0.283550194484773,0.358234090811393,0.871901815541886,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0,0,0.763976851116555,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,2.10833939483032,0,1.14861935834114,0,0,0.410952645100767,0,0.896681151948218,0.788123040807709,0.646882724578552,0.641715181398742,0,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,0.415941723061614,0.356857977594324,0.630809660135739,0.35142424497814,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0.413536052245775,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,1.20859449591622,0.200506470303285,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,1.31555925987561,0.522870902049801,0.256450125116389,0.328014645699706,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0.322260734604821,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0.382838137483752,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0.648473311192717,0,0.79312517629427,0.213648142254946,0,0,0.929015875628594,1.00988449083511,0.355709216742071,0.797131363644112,0.199579371432817,0.191505370132367,0,0.324621940274555,0.842391534340376,0.456469358066384,0.783399478865116,0,0.338583555603207,0.642352300414798,1.61439765752838,1.27753871307098,0,0,0,0.166849141711909,0.781552381608161,1.11362469558097,0,0,0,0,0.561421621224659,0.146508179271894,0.242721043499027,0.334330152832435,0.568272293612826,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.422008249231538,0.222617410045812,0.494411622680279,1.26675244876796,0.597743964753209,0,0.503865495708552,0,0.369254416383208,0,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0.371072392647405,0,0.260427761085233,0.262379999988587,0,0.568967241427498,0.254253650292766,0.236387681767936,0.689486746482929,0.291604613383254,1.73624994933292,0,1.20596438625408,1.52581736317083,1.76926815889959,0.2955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| ||
|short_description=p10@LUC7L3 | |||
}} | }} |
Latest revision as of 03:55, 16 September 2015
Short description: | p10@LUC7L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LUC7L3_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_ENST00000511068_5end |
EntrezGene: | LUC7L3 |
HGNC: | 24309 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.03e-15 | 56 |
neural rod | 2.03e-15 | 56 |
future spinal cord | 2.03e-15 | 56 |
neural keel | 2.03e-15 | 56 |
nervous system | 5.59e-13 | 89 |
regional part of nervous system | 1.17e-12 | 53 |
regional part of brain | 1.17e-12 | 53 |
central nervous system | 6.25e-12 | 81 |
neurectoderm | 4.13e-11 | 86 |
neural plate | 1.73e-10 | 82 |
presumptive neural plate | 1.73e-10 | 82 |
brain | 2.49e-10 | 68 |
future brain | 2.49e-10 | 68 |
brain grey matter | 1.06e-09 | 34 |
gray matter | 1.06e-09 | 34 |
regional part of forebrain | 2.29e-09 | 41 |
forebrain | 2.29e-09 | 41 |
anterior neural tube | 2.29e-09 | 41 |
future forebrain | 2.29e-09 | 41 |
regional part of telencephalon | 1.25e-08 | 32 |
cerebral hemisphere | 1.25e-08 | 32 |
adult organism | 2.31e-08 | 114 |
ecto-epithelium | 2.31e-08 | 104 |
telencephalon | 5.00e-08 | 34 |
middle temporal gyrus | 5.59e-08 | 2 |
globus pallidus | 6.21e-08 | 2 |
pallidum | 6.21e-08 | 2 |
posterior neural tube | 6.50e-08 | 15 |
chordal neural plate | 6.50e-08 | 15 |
organ system subdivision | 6.53e-08 | 223 |
structure with developmental contribution from neural crest | 2.28e-07 | 132 |
neocortex | 2.53e-07 | 20 |