FFCP PHASE1:Hg19::chr11:119252271..119252296,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:119252271..119252296,- to FFCP PHASE1:Hg19::chr11:119252271..119252296,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9099 | |EntrezGene=9099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12618 | |HGNC=12618 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKS7 | |UniProt=E9PKS7 | ||
|association_with_transcript=24bp_to_ENST00000530918_5end | |||
|cluster_id=chr11:119252271..119252296,- | |||
|description=CAGE_peak_7_at_USP2_5end | |||
|id=chr11:119252271..119252296,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.61e-19!115;UBERON:0001049!6.77e-15!57;UBERON:0005068!6.77e-15!57;UBERON:0006241!6.77e-15!57;UBERON:0007135!6.77e-15!57;UBERON:0005743!3.11e-14!86;UBERON:0002346!6.57e-14!90;UBERON:0002780!7.92e-14!41;UBERON:0001890!7.92e-14!41;UBERON:0006240!7.92e-14!41;UBERON:0000073!1.60e-13!94;UBERON:0001016!1.60e-13!94;UBERON:0003080!4.14e-13!42;UBERON:0003075!4.87e-13!86;UBERON:0007284!4.87e-13!86;UBERON:0001017!6.83e-13!82;UBERON:0000955!2.91e-12!69;UBERON:0006238!2.91e-12!69;UBERON:0002616!3.37e-12!59;UBERON:0001893!1.61e-11!34;UBERON:0002020!2.54e-11!34;UBERON:0003528!2.54e-11!34;UBERON:0002791!4.13e-11!33;UBERON:0001869!3.01e-10!32;UBERON:0000924!3.02e-10!173;UBERON:0006601!3.02e-10!173;UBERON:0003056!7.67e-10!61;UBERON:0004121!1.54e-09!169;UBERON:0000153!3.89e-09!129;UBERON:0007811!3.89e-09!129;UBERON:0000062!5.79e-09!511;UBERON:0000033!1.52e-08!123;UBERON:0002619!5.81e-08!22;UBERON:0000956!2.39e-07!25;UBERON:0000203!2.39e-07!25;UBERON:0001950!7.15e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.28e-07;41!UBERON:0001890;1.28e-07;41!UBERON:0001737;4.41e-07;9!UBERON:0001557;4.41e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.89e-18,114;UBERON:0001016,1.45e-10,89;UBERON:0001017,1.76e-10,81;UBERON:0001049,2.16e-10,56;UBERON:0005068,2.16e-10,56;UBERON:0006241,2.16e-10,56;UBERON:0007135,2.16e-10,56;UBERON:0000073,5.89e-09,53;UBERON:0002616,5.89e-09,53;UBERON:0002780,6.86e-09,41;UBERON:0001890,6.86e-09,41;UBERON:0003080,6.86e-09,41;UBERON:0006240,6.86e-09,41;UBERON:0003075,7.88e-09,82;UBERON:0007284,7.88e-09,82;UBERON:0011216,1.10e-08,223;UBERON:0000955,1.84e-08,68;UBERON:0006238,1.84e-08,68;UBERON:0002346,3.96e-08,86;UBERON:0004121,5.92e-08,171;UBERON:0000924,5.92e-08,171;UBERON:0006601,5.92e-08,171;UBERON:0010371,4.96e-07,104;UBERON:0001737,5.04e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,1.34088328328186,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0.369363174230364,0,0,0.286235987131057,0.273748850145768,0,0,0,0.0787107813136792,0.393364276848904,0,0.619264493264304,1.83884244895785,0,0,1.85921281392724,0.426507697462265,0,0,0.601633342410425,1.30206522429511,0,0,0,0.290796477559129,0.377875943688809,0.242584061187816,0.697287110717054,0,1.23882548358041,0.575384784644301,1.2808035326455,0.236482229888585,1.37898272294647,1.93645405075148,4.06279459783025,0.376484679085209,0,0.224723484445085,0.612167784741805,0.320929027076094,1.91801137739712,0.329851300186716,0.398927315243264,0,0,0,0,0.75374599577023,0,0.868755378820466,0,0.736555271975129,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.983548850569165,2.35806457649499,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444859689486181,0,0,0,0.766440987203842,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0,0,0.80642697289893,0.267440195783507,1.01377082717959,0,0,0,0,0.50133791063589,0.869079113764942,0,0,0,0,0,0.589405839739707,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0.352303495931295,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0.438977620880838,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.292311015483596,0,0.368199594569197,0,0.355009592516614,0,0,0.773043412653187,0,0.286804595389004,0.609868530647977,0.927708378250397,0.116193942869518,0.310983165046111,0.504641701751257,0.36497735907583,0,0,0,0,0,1.30137480043828,1.34867752062481,0.241011029883482,0.992645754591546,0.653638332277218,2.13543557199987,1.48314438976181,1.76599318612811,1.15424147083917,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0.491953754172454,0,0.548751427043128,0,0.201057944823262,0,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.289562613335158,0.61642896765115,1.43248770591916,0,0,1.50939302401662,0.385029108839245,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0.623912584592421,0.892144943985809,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0.431428401637234,0.320182673410333,0,0,0.604780586659361,0,0.460385919864187,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0.364182336013434,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.650756789328606,0.309123034943167,0.27470839445503,0.165018999841176,0.574265537996172,1.95018073810956,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.848432591722276,0,0,0,0,1.15755106853338,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.75894634753143,0.349934720244983,0.384888450902048,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,1.1750647824022,0,2.94048259177238,0,0,0,0,0,0,0,0.324621940274555,0,0.456469358066384,0.313359791546046,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.390776190804081,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0.445773537109913,0,3.81991175580304,0,4.91457123358771,2.98244294329889,1.1253553312841,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.492339221844278,0,0.359473404589307,0,0,0.591860433821602,0,0,1.93866549219044,1.57705766875147,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,1.18193840883968,0,0,0.347249989866585,0.885741385813839,0.844175070377856,0,0.442317039724898,0,2.19385397153973,0.653630781113941,1.53366118706464,0.615602068030377,0.227884111694002,0.46112780877612,0.0897576444097721,1.19512109114209,0.638002319463839,0,0,0,0.31396051279005,0.166211681900156,1.80476528493745,1.37243774022418,1.34257269580674,0.75901493089674,0,0,2.61172493054636,0.565412285735763,0.432777279484182,2.98578579323551,0.176915129006678,0,0.296521128680622,0.123563938946503,0.522109747527277,2.83084758518844,2.40773294189637,2.10838001152805,0,1.56531695145672,0.485560759068186,0,0,0,1.39010475182674,0.150323419414493,0.103688191397247,0,0,0.313932918407225,0,0,0.138674673013139,0,0.783939179315021,0.0870592065804026,1.57254001417827,2.40780445460263,0.483781656445426,0.0730893170861856,0.328461828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| ||
|short_description=p7@USP2 | |||
}} | }} |
Latest revision as of 03:45, 16 September 2015
Short description: | p7@USP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_USP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000530918_5end |
EntrezGene: | USP2 |
HGNC: | 12618 |
UniProt: | E9PKS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.89e-18 | 114 |
nervous system | 1.45e-10 | 89 |
central nervous system | 1.76e-10 | 81 |
neural tube | 2.16e-10 | 56 |
neural rod | 2.16e-10 | 56 |
future spinal cord | 2.16e-10 | 56 |
neural keel | 2.16e-10 | 56 |
regional part of nervous system | 5.89e-09 | 53 |
regional part of brain | 5.89e-09 | 53 |
regional part of forebrain | 6.86e-09 | 41 |
forebrain | 6.86e-09 | 41 |
anterior neural tube | 6.86e-09 | 41 |
future forebrain | 6.86e-09 | 41 |
neural plate | 7.88e-09 | 82 |
presumptive neural plate | 7.88e-09 | 82 |
organ system subdivision | 1.10e-08 | 223 |
brain | 1.84e-08 | 68 |
future brain | 1.84e-08 | 68 |
neurectoderm | 3.96e-08 | 86 |
ectoderm-derived structure | 5.92e-08 | 171 |
ectoderm | 5.92e-08 | 171 |
presumptive ectoderm | 5.92e-08 | 171 |
ecto-epithelium | 4.96e-07 | 104 |
larynx | 5.04e-07 | 9 |