FFCP PHASE1:Hg19::chr10:105212141..105212183,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51063 | |EntrezGene=51063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23493 | |HGNC=23493 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HA72 | |UniProt=Q9HA72 | ||
|association_with_transcript=0bp_to_ENST00000369788,ENST00000461631,NM_015916,NR_024552,uc001kxa.2,uc001kxb.2,uc001kxc.2_5end | |association_with_transcript=0bp_to_ENST00000369788,ENST00000461631,NM_015916,NR_024552,uc001kxa.2,uc001kxb.2,uc001kxc.2_5end | ||
|cluster_id=chr10:105212141..105212183,- | |||
|coexpression_cluster_id=C2974 | |||
|description=CAGE_peak_3_at_CALHM2_5end | |description=CAGE_peak_3_at_CALHM2_5end | ||
|id=chr10:105212141..105212183,- | |id=chr10:105212141..105212183,- | ||
|ontology_enrichment_celltype=CL:0000057!3.99e-14!75;CL:0000048!1.87e-09!430;CL:0000723!1.36e-08!436;CL:0002320!2.00e-08!365;CL:0000055!2.65e-08!180;CL:0000134!7.47e-08!358;CL:0000034!2.61e-07!444;CL:0002620!3.46e-07!23 | |ontology_enrichment_celltype=CL:0000057!3.99e-14!75;CL:0000048!1.87e-09!430;CL:0000723!1.36e-08!436;CL:0002320!2.00e-08!365;CL:0000055!2.65e-08!180;CL:0000134!7.47e-08!358;CL:0000034!2.61e-07!444;CL:0002620!3.46e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.74e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-14,76;CL:0000048,8.79e-11,427;CL:0000723,8.21e-10,433;CL:0002320,1.68e-09,361;CL:0000134,6.89e-09,354;CL:0000034,2.87e-08,441;CL:0002620,3.22e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.64e-11!216;UBERON:0002384!2.15e-08!375;UBERON:0004535!1.28e-07!110;UBERON:0001009!1.54e-07!113;UBERON:0002193!6.21e-07!112;UBERON:0002204!7.35e-07!167 | |ontology_enrichment_uberon=UBERON:0003081!2.64e-11!216;UBERON:0002384!2.15e-08!375;UBERON:0004535!1.28e-07!110;UBERON:0001009!1.54e-07!113;UBERON:0002193!6.21e-07!112;UBERON:0002204!7.35e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.27e-16,315;UBERON:0004120,8.27e-16,315;UBERON:0006603,8.27e-16,315;UBERON:0003081,4.03e-14,203;UBERON:0002384,2.04e-09,371;UBERON:0002193,5.13e-08,108;UBERON:0002204,7.40e-08,167;UBERON:0004535,1.55e-07,109;UBERON:0001009,1.86e-07,112;UBERON:0002390,8.37e-07,98;UBERON:0003061,8.37e-07,98 | |||
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| ||
|short_description=p3@CALHM2 | |short_description=p3@CALHM2 | ||
}} | }} |
Latest revision as of 03:39, 16 September 2015
Short description: | p3@CALHM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CALHM2_5end |
Coexpression cluster: | C2974_Mesenchymal_tenocyte_CD14_Cardiac_Synoviocyte_mesodermal_Hepatic |
Association with transcript: | 0bp_to_ENST00000369788, ENST00000461631, NM_015916, NR_024552, uc001kxa.2, uc001kxb.2, uc001kxc.2_5end |
EntrezGene: | CALHM2 |
HGNC: | 23493 |
UniProt: | Q9HA72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-14 | 76 |
multi fate stem cell | 8.79e-11 | 427 |
somatic stem cell | 8.21e-10 | 433 |
connective tissue cell | 1.68e-09 | 361 |
mesenchymal cell | 6.89e-09 | 354 |
stem cell | 2.87e-08 | 441 |
skin fibroblast | 3.22e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.27e-16 | 315 |
mesoderm-derived structure | 8.27e-16 | 315 |
presumptive mesoderm | 8.27e-16 | 315 |
lateral plate mesoderm | 4.03e-14 | 203 |
connective tissue | 2.04e-09 | 371 |
hemolymphoid system | 5.13e-08 | 108 |
musculoskeletal system | 7.40e-08 | 167 |
cardiovascular system | 1.55e-07 | 109 |
circulatory system | 1.86e-07 | 112 |
hematopoietic system | 8.37e-07 | 98 |
blood island | 8.37e-07 | 98 |