FFCP PHASE1:Hg19::chr1:228353495..228353516,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200205 | |EntrezGene=200205 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27302 | |HGNC=27302 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T440 | |UniProt=Q5T440 | ||
|association_with_transcript=0bp_to_ENST00000366711_5end | |association_with_transcript=0bp_to_ENST00000366711_5end | ||
|cluster_id=chr1:228353495..228353516,+ | |||
|description=CAGE_peak_1_at_IBA57_5end | |description=CAGE_peak_1_at_IBA57_5end | ||
|id=chr1:228353495..228353516,+ | |id=chr1:228353495..228353516,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.97e-14!172;CL:0000566!1.97e-14!172;CL:0000988!5.80e-14!182;CL:0002032!6.13e-12!165;CL:0000837!6.13e-12!165;CL:0000738!4.74e-10!140;CL:0002087!4.47e-09!119;CL:0000838!5.20e-09!52;CL:0002031!5.52e-09!124;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53;CL:0000791!2.45e-08!18;CL:0000789!2.45e-08!18;CL:0002420!2.45e-08!18;CL:0002419!2.45e-08!18;CL:0000790!2.45e-08!18;CL:0000084!8.35e-07!25;CL:0000827!8.35e-07!25 | |ontology_enrichment_celltype=CL:0000037!1.97e-14!172;CL:0000566!1.97e-14!172;CL:0000988!5.80e-14!182;CL:0002032!6.13e-12!165;CL:0000837!6.13e-12!165;CL:0000738!4.74e-10!140;CL:0002087!4.47e-09!119;CL:0000838!5.20e-09!52;CL:0002031!5.52e-09!124;CL:0000542!1.18e-08!53;CL:0000051!1.18e-08!53;CL:0000791!2.45e-08!18;CL:0000789!2.45e-08!18;CL:0002420!2.45e-08!18;CL:0002419!2.45e-08!18;CL:0000790!2.45e-08!18;CL:0000084!8.35e-07!25;CL:0000827!8.35e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.42e-08;18!CL:0000789;2.42e-08;18!CL:0002419;2.42e-08;18 | |ontology_enrichment_celltype_v019=CL:0000791;2.42e-08;18!CL:0000789;2.42e-08;18!CL:0002419;2.42e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.68e-16,168;CL:0000988,2.77e-15,177;CL:0002032,3.99e-13,161;CL:0000837,3.99e-13,161;CL:0000738,3.24e-11,136;CL:0002087,2.83e-10,115;CL:0002031,3.81e-10,120;CL:0000838,5.20e-09,52;CL:0000542,1.18e-08,53;CL:0000051,1.18e-08,53;CL:0000791,2.45e-08,18;CL:0000789,2.45e-08,18;CL:0002420,2.45e-08,18;CL:0002419,2.45e-08,18;CL:0000790,2.45e-08,18;CL:0000084,8.35e-07,25;CL:0000827,8.35e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;2.42e-08;18 | |ontology_enrichment_development_v019=CL:0000790;2.42e-08;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@IBA57 | |short_description=p1@IBA57 | ||
}} | }} |
Latest revision as of 03:37, 16 September 2015
Short description: | p1@IBA57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IBA57_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366711_5end |
EntrezGene: | IBA57 |
HGNC: | 27302 |
UniProt: | Q5T440 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.68e-16 | 168 |
hematopoietic cell | 2.77e-15 | 177 |
hematopoietic oligopotent progenitor cell | 3.99e-13 | 161 |
hematopoietic multipotent progenitor cell | 3.99e-13 | 161 |
leukocyte | 3.24e-11 | 136 |
nongranular leukocyte | 2.83e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.81e-10 | 120 |
lymphoid lineage restricted progenitor cell | 5.20e-09 | 52 |
lymphocyte | 1.18e-08 | 53 |
common lymphoid progenitor | 1.18e-08 | 53 |
mature alpha-beta T cell | 2.45e-08 | 18 |
alpha-beta T cell | 2.45e-08 | 18 |
immature T cell | 2.45e-08 | 18 |
mature T cell | 2.45e-08 | 18 |
immature alpha-beta T cell | 2.45e-08 | 18 |
T cell | 8.35e-07 | 25 |
pro-T cell | 8.35e-07 | 25 |