FFCP PHASE1:Hg19::chr8:126442570..126442624,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:126442570..126442624,+ to FFCP PHASE1:Hg19::chr8:126442570..126442624,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10221 | |EntrezGene=10221 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16891 | |HGNC=16891 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RU8 | |UniProt=Q96RU8 | ||
|association_with_transcript=7bp_to_ENST00000311922,NM_025195,uc003yrx.2_5end | |||
|cluster_id=chr8:126442570..126442624,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TRIB1_5end | |||
|id=chr8:126442570..126442624,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.30e-27!76;CL:0002009!1.78e-26!65;CL:0002057!2.73e-26!42;CL:0000860!2.08e-25!45;CL:0002194!2.40e-25!63;CL:0000576!2.40e-25!63;CL:0000040!2.40e-25!63;CL:0000559!2.40e-25!63;CL:0000557!3.24e-23!71;CL:0000839!1.27e-19!70;CL:0000763!4.23e-15!112;CL:0000049!4.23e-15!112;CL:0000066!6.94e-09!254;CL:0000738!4.83e-07!140;CL:0000094!9.81e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.80e-20;33!CL:0002057;7.80e-20;33!CL:0000473;1.67e-18;39!CL:0000234;1.67e-18;39!CL:0000576;5.43e-16;48!CL:0000766;1.49e-12;69!CL:0000094;9.77e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.68e-28,48;CL:0000234,1.68e-28,48;CL:0000766,4.46e-28,72;CL:0002009,6.76e-28,61;CL:0002194,9.47e-27,59;CL:0000576,9.47e-27,59;CL:0000040,9.47e-27,59;CL:0000559,9.47e-27,59;CL:0000860,2.73e-26,42;CL:0002057,2.73e-26,42;CL:0000557,2.45e-24,67;CL:0000839,1.40e-20,66;CL:0000763,1.62e-15,108;CL:0000049,1.62e-15,108;CL:0000066,6.45e-09,253;CL:0000738,3.81e-07,136;CL:0000223,4.97e-07,58;CL:0000094,9.81e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.10e-19;42 | |||
|ontology_enrichment_disease=DOID:305!3.23e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.23e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.26e-24!102;UBERON:0003061!5.26e-24!102;UBERON:0002193!6.52e-24!112;UBERON:0002405!1.66e-21!115;UBERON:0002371!3.73e-20!80;UBERON:0001474!5.79e-20!86;UBERON:0004765!5.79e-14!101;UBERON:0001434!5.79e-14!101;UBERON:0003081!2.83e-12!216;UBERON:0000926!5.69e-12!448;UBERON:0004120!5.69e-12!448;UBERON:0006603!5.69e-12!448;UBERON:0000922!3.78e-10!612;UBERON:0000923!1.06e-09!604;UBERON:0005291!1.06e-09!604;UBERON:0006598!1.06e-09!604;UBERON:0002532!1.06e-09!604;UBERON:0002050!2.01e-09!605;UBERON:0005423!2.01e-09!605;UBERON:0000468!3.15e-08!659;UBERON:0000480!6.00e-08!626;UBERON:0000467!1.06e-07!625;UBERON:0000466!4.68e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.20e-25,98;UBERON:0003061,9.20e-25,98;UBERON:0002193,1.39e-24,108;UBERON:0002371,5.45e-21,76;UBERON:0001474,1.01e-20,82;UBERON:0004765,9.57e-20,90;UBERON:0002405,1.45e-19,93;UBERON:0001434,1.12e-14,100;UBERON:0003081,1.16e-11,203;UBERON:0000922,2.40e-09,592;UBERON:0005423,5.19e-08,581;UBERON:0000923,6.10e-08,560;UBERON:0010316,6.10e-08,560;UBERON:0005291,6.10e-08,560;UBERON:0006598,6.10e-08,560;UBERON:0010317,6.10e-08,560;UBERON:0002532,6.10e-08,560;UBERON:0002050,2.14e-07,564 | |||
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| ||
|short_description=p1@TRIB1 | |||
}} | }} |
Latest revision as of 03:29, 16 September 2015
Short description: | p1@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIB1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 7bp_to_ENST00000311922, NM_025195, uc003yrx.2_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | Q96RU8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.68e-28 | 48 |
phagocyte | 1.68e-28 | 48 |
myeloid leukocyte | 4.46e-28 | 72 |
macrophage dendritic cell progenitor | 6.76e-28 | 61 |
monopoietic cell | 9.47e-27 | 59 |
monocyte | 9.47e-27 | 59 |
monoblast | 9.47e-27 | 59 |
promonocyte | 9.47e-27 | 59 |
classical monocyte | 2.73e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-26 | 42 |
granulocyte monocyte progenitor cell | 2.45e-24 | 67 |
myeloid lineage restricted progenitor cell | 1.40e-20 | 66 |
myeloid cell | 1.62e-15 | 108 |
common myeloid progenitor | 1.62e-15 | 108 |
epithelial cell | 6.45e-09 | 253 |
leukocyte | 3.81e-07 | 136 |
endodermal cell | 4.97e-07 | 58 |
granulocyte | 9.81e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.20e-25 | 98 |
blood island | 9.20e-25 | 98 |
hemolymphoid system | 1.39e-24 | 108 |
bone marrow | 5.45e-21 | 76 |
bone element | 1.01e-20 | 82 |
skeletal element | 9.57e-20 | 90 |
immune system | 1.45e-19 | 93 |
skeletal system | 1.12e-14 | 100 |
lateral plate mesoderm | 1.16e-11 | 203 |
embryo | 2.40e-09 | 592 |
developing anatomical structure | 5.19e-08 | 581 |
germ layer | 6.10e-08 | 560 |
germ layer / neural crest | 6.10e-08 | 560 |
embryonic tissue | 6.10e-08 | 560 |
presumptive structure | 6.10e-08 | 560 |
germ layer / neural crest derived structure | 6.10e-08 | 560 |
epiblast (generic) | 6.10e-08 | 560 |
embryonic structure | 2.14e-07 | 564 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.23e-07 | 106 |