FFCP PHASE1:Hg19::chr12:96588279..96588299,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2004 | |EntrezGene=2004 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3325 | |HGNC=3325 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1Z7 | |UniProt=G3V1Z7 | ||
|association_with_transcript=-23bp_to_ENST00000552142_5end | |association_with_transcript=-23bp_to_ENST00000552142_5end | ||
|cluster_id=chr12:96588279..96588299,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_4_at_ELK3_5end | |description=CAGE_peak_4_at_ELK3_5end | ||
|id=chr12:96588279..96588299,+ | |id=chr12:96588279..96588299,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.07e-22!42;CL:0000860!1.41e-19!45;CL:0002194!1.76e-13!63;CL:0000576!1.76e-13!63;CL:0000040!1.76e-13!63;CL:0000559!1.76e-13!63;CL:0002009!4.22e-13!65;CL:0000557!1.97e-10!71;CL:0000839!1.33e-09!70;CL:0000766!3.67e-09!76;CL:0002087!8.42e-07!119 | |ontology_enrichment_celltype=CL:0002057!4.07e-22!42;CL:0000860!1.41e-19!45;CL:0002194!1.76e-13!63;CL:0000576!1.76e-13!63;CL:0000040!1.76e-13!63;CL:0000559!1.76e-13!63;CL:0002009!4.22e-13!65;CL:0000557!1.97e-10!71;CL:0000839!1.33e-09!70;CL:0000766!3.67e-09!76;CL:0002087!8.42e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.79e-20;33!CL:0002057;1.79e-20;33!CL:0000473;1.22e-14;39!CL:0000234;1.22e-14;39!CL:0000576;1.27e-13;48!CL:0000766;3.27e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.40e-22,42;CL:0002057,3.40e-22,42;CL:0000473,2.89e-19,48;CL:0000234,2.89e-19,48;CL:0002194,1.99e-15,59;CL:0000576,1.99e-15,59;CL:0000040,1.99e-15,59;CL:0000559,1.99e-15,59;CL:0002009,5.82e-15,61;CL:0000557,6.31e-12,67;CL:0000839,3.72e-11,66;CL:0000766,1.62e-10,72;CL:0002087,2.17e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.29e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.20e-18!216;UBERON:0002193!1.30e-15!112;UBERON:0002390!5.93e-14!102;UBERON:0003061!5.93e-14!102;UBERON:0002371!2.47e-11!80;UBERON:0002204!4.61e-10!167;UBERON:0004765!8.47e-10!101;UBERON:0001434!8.47e-10!101;UBERON:0001474!2.42e-09!86;UBERON:0000926!1.03e-08!448;UBERON:0004120!1.03e-08!448;UBERON:0006603!1.03e-08!448;UBERON:0002405!2.37e-08!115;UBERON:0001009!4.69e-08!113;UBERON:0004535!7.77e-08!110 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.27e-17,203;UBERON:0002193,3.50e-17,108;UBERON:0002390,1.71e-15,98;UBERON:0003061,1.71e-15,98;UBERON:0002405,5.78e-15,93;UBERON:0000926,3.18e-14,315;UBERON:0004120,3.18e-14,315;UBERON:0006603,3.18e-14,315;UBERON:0002371,8.50e-13,76;UBERON:0004765,8.61e-12,90;UBERON:0001434,3.23e-11,100;UBERON:0002204,4.01e-11,167;UBERON:0001474,1.83e-10,82;UBERON:0001009,2.11e-08,112;UBERON:0004535,3.50e-08,109 | |||
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| ||
|short_description=p4@ELK3 | |short_description=p4@ELK3 | ||
}} | }} |
Latest revision as of 03:24, 16 September 2015
Short description: | p4@ELK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ELK3_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | -23bp_to_ENST00000552142_5end |
EntrezGene: | ELK3 |
HGNC: | 3325 |
UniProt: | G3V1Z7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.40e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.40e-22 | 42 |
defensive cell | 2.89e-19 | 48 |
phagocyte | 2.89e-19 | 48 |
monopoietic cell | 1.99e-15 | 59 |
monocyte | 1.99e-15 | 59 |
monoblast | 1.99e-15 | 59 |
promonocyte | 1.99e-15 | 59 |
macrophage dendritic cell progenitor | 5.82e-15 | 61 |
granulocyte monocyte progenitor cell | 6.31e-12 | 67 |
myeloid lineage restricted progenitor cell | 3.72e-11 | 66 |
myeloid leukocyte | 1.62e-10 | 72 |
nongranular leukocyte | 2.17e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 3.27e-17 | 203 |
hemolymphoid system | 3.50e-17 | 108 |
hematopoietic system | 1.71e-15 | 98 |
blood island | 1.71e-15 | 98 |
immune system | 5.78e-15 | 93 |
mesoderm | 3.18e-14 | 315 |
mesoderm-derived structure | 3.18e-14 | 315 |
presumptive mesoderm | 3.18e-14 | 315 |
bone marrow | 8.50e-13 | 76 |
skeletal element | 8.61e-12 | 90 |
skeletal system | 3.23e-11 | 100 |
musculoskeletal system | 4.01e-11 | 167 |
bone element | 1.83e-10 | 82 |
circulatory system | 2.11e-08 | 112 |
cardiovascular system | 3.50e-08 | 109 |