FFCP PHASE1:Hg19::chr3:152880098..152880109,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5912 | |EntrezGene=5912 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9862 | |HGNC=9862 | ||
|TSSclassifier=strong | |||
|UniProt=P61225,Q5JQ44 | |UniProt=P61225,Q5JQ44 | ||
|association_with_transcript=69bp_to_ENST00000323534,NM_002886,uc003ezr.2_5end | |association_with_transcript=69bp_to_ENST00000323534,NM_002886,uc003ezr.2_5end | ||
|cluster_id=chr3:152880098..152880109,+ | |||
|coexpression_cluster_id=C847 | |coexpression_cluster_id=C847 | ||
|description=CAGE_peak_2_at_RAP2B_5end | |description=CAGE_peak_2_at_RAP2B_5end | ||
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|ontology_enrichment_celltype=CL:0002009!8.36e-25!65;CL:0002194!5.72e-24!63;CL:0000576!5.72e-24!63;CL:0000040!5.72e-24!63;CL:0000559!5.72e-24!63;CL:0000557!1.95e-22!71;CL:0000839!2.50e-22!70;CL:0002057!8.77e-22!42;CL:0000766!6.86e-20!76;CL:0000860!8.58e-20!45;CL:0002087!1.13e-16!119;CL:0002031!1.59e-16!124;CL:0000738!2.31e-16!140;CL:0000763!2.61e-16!112;CL:0000049!2.61e-16!112;CL:0000037!2.64e-14!172;CL:0000566!2.64e-14!172;CL:0000988!6.06e-14!182;CL:0002032!3.38e-13!165;CL:0000837!3.38e-13!165;CL:0000063!7.81e-13!578;CL:0002371!1.56e-09!591;CL:0000548!1.97e-08!679;CL:0000004!1.97e-08!679;CL:0000255!1.97e-08!679;CL:0000012!4.25e-08!682;CL:0000144!1.42e-07!625 | |ontology_enrichment_celltype=CL:0002009!8.36e-25!65;CL:0002194!5.72e-24!63;CL:0000576!5.72e-24!63;CL:0000040!5.72e-24!63;CL:0000559!5.72e-24!63;CL:0000557!1.95e-22!71;CL:0000839!2.50e-22!70;CL:0002057!8.77e-22!42;CL:0000766!6.86e-20!76;CL:0000860!8.58e-20!45;CL:0002087!1.13e-16!119;CL:0002031!1.59e-16!124;CL:0000738!2.31e-16!140;CL:0000763!2.61e-16!112;CL:0000049!2.61e-16!112;CL:0000037!2.64e-14!172;CL:0000566!2.64e-14!172;CL:0000988!6.06e-14!182;CL:0002032!3.38e-13!165;CL:0000837!3.38e-13!165;CL:0000063!7.81e-13!578;CL:0002371!1.56e-09!591;CL:0000548!1.97e-08!679;CL:0000004!1.97e-08!679;CL:0000255!1.97e-08!679;CL:0000012!4.25e-08!682;CL:0000144!1.42e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.73e-32;39!CL:0000234;3.73e-32;39!CL:0000860;2.01e-30;33!CL:0002057;2.01e-30;33!CL:0000576;1.28e-26;48!CL:0000766;2.78e-19;69!CL:0000235;6.29e-10;6!CL:0000763;2.21e-08;100!CL:0002087;6.78e-08;104!CL:0000738;1.03e-07;136!CL:0002076;6.72e-07;42 | |ontology_enrichment_celltype_v019=CL:0000473;3.73e-32;39!CL:0000234;3.73e-32;39!CL:0000860;2.01e-30;33!CL:0002057;2.01e-30;33!CL:0000576;1.28e-26;48!CL:0000766;2.78e-19;69!CL:0000235;6.29e-10;6!CL:0000763;2.21e-08;100!CL:0002087;6.78e-08;104!CL:0000738;1.03e-07;136!CL:0002076;6.72e-07;42 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.05e-49,61;CL:0002194,2.07e-49,59;CL:0000576,2.07e-49,59;CL:0000040,2.07e-49,59;CL:0000559,2.07e-49,59;CL:0000473,2.96e-48,48;CL:0000234,2.96e-48,48;CL:0000557,1.96e-43,67;CL:0000839,2.31e-42,66;CL:0000766,2.14e-41,72;CL:0000860,8.37e-40,42;CL:0002057,8.37e-40,42;CL:0002087,1.12e-30,115;CL:0000738,2.27e-28,136;CL:0002031,1.19e-27,120;CL:0000763,1.69e-26,108;CL:0000049,1.69e-26,108;CL:0000037,1.06e-21,168;CL:0002032,3.12e-20,161;CL:0000837,3.12e-20,161;CL:0000988,1.53e-19,177;CL:0000235,5.97e-10,6;CL:0002076,4.82e-09,42;CL:0002393,1.81e-08,9;CL:0002397,1.81e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.75e-29;42!CL:0000049;1.51e-09;108 | |ontology_enrichment_development_v019=CL:0002057;6.75e-29;42!CL:0000049;1.51e-09;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;4.38e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;4.38e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,5.14e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-20!80;UBERON:0001474!2.13e-18!86;UBERON:0004765!3.58e-17!101;UBERON:0001434!3.58e-17!101;UBERON:0002390!4.10e-17!102;UBERON:0003061!4.10e-17!102;UBERON:0002193!1.45e-16!112;UBERON:0002405!2.27e-12!115;UBERON:0002204!3.77e-08!167;UBERON:0003081!4.02e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.49e-20!80;UBERON:0001474!2.13e-18!86;UBERON:0004765!3.58e-17!101;UBERON:0001434!3.58e-17!101;UBERON:0002390!4.10e-17!102;UBERON:0003061!4.10e-17!102;UBERON:0002193!1.45e-16!112;UBERON:0002405!2.27e-12!115;UBERON:0002204!3.77e-08!167;UBERON:0003081!4.02e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.88e-38,76;UBERON:0001474,5.60e-34,82;UBERON:0004765,3.71e-32,90;UBERON:0002390,2.00e-30,98;UBERON:0003061,2.00e-30,98;UBERON:0002405,6.30e-28,93;UBERON:0001434,3.54e-27,100;UBERON:0002193,6.12e-26,108;UBERON:0002204,8.03e-13,167;UBERON:0003081,9.35e-11,203 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0,0.37129905888014,0,0,0.602694528023977,0,0.487932798790507,0,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.236132343941038,3.14691421479123,0.767658796194425,4.95411594611443,0,1.50602959389125,2.21852406100073,0,0,0,0.553995408531877,3.20871115952227,1.30206522429511,11.1957737119962,9.39291631455041,8.49999373192816,11.6318591023652,22.6725566213286,14.555043671269,5.81072592264212,17.6802191849385,3.71647645074124,3.16461631554365,3.07392847834921,2.83778675866302,12.0660988257816,6.45484683583826,6.77132432971709,8.094420600332,21.0137735544541,2.9214052977861,10.4068523406107,11.5534449747394,12.1474053901818,2.30895910130701,8.97586459297343,4.26224750532694,0.290209238628584,2.8369261234557,0,2.26123798731069,6.25779502104242,2.17188844705117,0.605399502633369,1.10483290796269,0.949387162322653,3.16882929467913,1.91343869968539,1.67726916406701,2.58355851636939,1.95229960693958,1.12507910687956,1.42506371870624,2.78483348078726,2.55729815270488,0,0,0,0.853460445133014,0.800791974072025,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,3.93010762749165,2.2616164889946,0.167186495390678,0.32592226663359,0,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0.328875809207352,1.65810010671509,0.579606171470105,0.14828656316206,0,0,0.453237370790265,0.383220493601921,0.68725489096526,1.77113784413652,0.318565414324097,0,0,0.301150238155546,0.383959833463255,2.49861453104692,0.710331756132051,2.46338399076314,1.81446068902259,4.54648332831962,1.88271725047639,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.43917392846563,0.196468613246569,2.5500670180478,1.85392221392215,4.86821090482025,3.83085422058388,5.98310822334893,0.715471872916026,1.14398982156026,1.48583000531826,0.596287222100115,0,1.04142150482278,0.56530794192401,0.838998872419812,0.550236083880135,1.04497483268405,0.516833518338658,0.71153252537342,0,2.01414658554573,0,0.488124115096339,1.10298924103761,1.62028389576352,0.267899184852239,0.22452937262617,0,0,0,0.549605231791222,0,0,1.3082821564276,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0.936480230490962,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0.612975591598039,0.45071417671979,0.226864366320042,0.179389635688862,0.213557388818567,0,0,0.309157587715317,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0.169560592310488,4.25173876959253,3.27295344709002,1.43402297694502,0,0.132529768321485,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0.464367928031979,0,0.236613600079688,0,0.241011029883482,0.220587945464788,0.435758888184812,0,0.269662616320329,0,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0.441463099414651,0,0,2.63400684980701,3.37205259772859,1.50793458617446,1.574003567695,0.325808305310325,0,0,0.34779121492523,0.587043471179108,0.288732895522148,0.462985512576611,0.190254152234598,0,0,9.84868024349589,2.57404691653161,7.8774516013026,1.87467667973554,1.6798212819886,0.425325291727159,1.25381931783988,2.3250715081117,1.15014803749563,0,0.088048434013226,0.414656231081544,0.288239906833923,0.50496973370552,1.46045156871989,3.81988425558278,3.51652341630141,5.13217338068116,0.719792448923265,2.70308752059526,2.00078502841405,0.448524337381443,0,0.5867062865676,0,0,0,0.797814349754612,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0.65147236858747,0,0,0.301439377059586,0,0.399891964728228,8.51366464488333,14.5654556515317,6.32501818449095,0.479249710983165,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.197030760201927,2.58753089831421,1.54011643535698,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.178428988797162,0,0.234282829985426,0,0,0,1.32845119707087,0.368738337083406,0.347534457872331,0.587403472388222,0.343143423810856,0.620304078368662,1.2942852049117,1.28073069364133,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0.355123450626254,0.492762936082855,1.03850885836724,0.697262270759755,0.362578348774867,4.81215528727884,0.920809889358963,0.114814448164607,0.364182336013434,0.262248829918848,2.70719767744447,1.84836809050595,0,0,1.79437769117889,0,0.680374821106063,0.215915916102139,0,0,0,1.01950509218015,2.49322802678617,0.671624264166535,0.438519753291869,0.261435451024901,0,0.656029291399411,0.650756789328606,0.103041011647722,0.366277859273374,0.247528499761764,1.14853107599234,0.650060246036521,0,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0,0,0.426133137080504,0.26709610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| ||
|short_description=p2@RAP2B | |short_description=p2@RAP2B | ||
}} | }} |
Latest revision as of 03:13, 16 September 2015
Short description: | p2@RAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAP2B_5end |
Coexpression cluster: | C847_Monocytederived_CD14_Macrophage_Dendritic_immature_adipose_lung |
Association with transcript: | 69bp_to_ENST00000323534, NM_002886, uc003ezr.2_5end |
EntrezGene: | RAP2B |
HGNC: | 9862 |
UniProt: | P61225Q5JQ44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.05e-49 | 61 |
monopoietic cell | 2.07e-49 | 59 |
monocyte | 2.07e-49 | 59 |
monoblast | 2.07e-49 | 59 |
promonocyte | 2.07e-49 | 59 |
defensive cell | 2.96e-48 | 48 |
phagocyte | 2.96e-48 | 48 |
granulocyte monocyte progenitor cell | 1.96e-43 | 67 |
myeloid lineage restricted progenitor cell | 2.31e-42 | 66 |
myeloid leukocyte | 2.14e-41 | 72 |
classical monocyte | 8.37e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.37e-40 | 42 |
nongranular leukocyte | 1.12e-30 | 115 |
leukocyte | 2.27e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 1.19e-27 | 120 |
myeloid cell | 1.69e-26 | 108 |
common myeloid progenitor | 1.69e-26 | 108 |
hematopoietic stem cell | 1.06e-21 | 168 |
hematopoietic oligopotent progenitor cell | 3.12e-20 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-20 | 161 |
hematopoietic cell | 1.53e-19 | 177 |
macrophage | 5.97e-10 | 6 |
endo-epithelial cell | 4.82e-09 | 42 |
intermediate monocyte | 1.81e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.81e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.88e-38 | 76 |
bone element | 5.60e-34 | 82 |
skeletal element | 3.71e-32 | 90 |
hematopoietic system | 2.00e-30 | 98 |
blood island | 2.00e-30 | 98 |
immune system | 6.30e-28 | 93 |
skeletal system | 3.54e-27 | 100 |
hemolymphoid system | 6.12e-26 | 108 |
musculoskeletal system | 8.03e-13 | 167 |
lateral plate mesoderm | 9.35e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.14e-07 | 14 |