FFCP PHASE1:Hg19::chr6:150217085..150217098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=135250 | |EntrezGene=135250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16793 | |HGNC=16793 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TD07 | |UniProt=Q8TD07 | ||
|association_with_transcript=96bp_to_ENST00000532335,NM_001243328,uc003qnj.2_5end | |||
|cluster_id=chr6:150217085..150217098,- | |||
|description=CAGE_peak_5_at_RAET1E_5end | |||
|id=chr6:150217085..150217098,- | |||
|ontology_enrichment_celltype=CL:0002150!2.87e-08!3;CL:0000861!2.87e-08!3;CL:0002620!5.18e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000244;4.86e-29;4!CL:0000731;4.86e-29;4!CL:0000317;2.05e-15;2!CL:1000448;2.05e-15;2!CL:0002308;2.05e-15;2!CL:0002140;2.05e-15;2!CL:0000622;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.65e-29,4;CL:0000731,3.65e-29,4;CL:0000317,2.37e-15,2;CL:1000448,2.37e-15,2;CL:0002308,2.37e-15,2;CL:0002140,2.37e-15,2;CL:0000622,6.39e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.17e-09!106;DOID:0050687!8.03e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:4556;9.90e-11;3!DOID:3908;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.20e-10,3;DOID:3908,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.03e-18!9;UBERON:0008947!3.17e-09!38;UBERON:0003258!3.17e-09!38;UBERON:0001557!8.41e-08!19;UBERON:0000065!2.06e-07!53;UBERON:0000072!5.55e-07!46;UBERON:0002097!6.52e-07!40;UBERON:0002199!9.69e-07!45;UBERON:0002416!9.69e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.81e-23;5!UBERON:0005910;9.49e-20;6!UBERON:0002419;2.05e-15;2!UBERON:0007771;2.05e-15;2!UBERON:0003297;2.05e-15;2!UBERON:0001821;2.05e-15;2!UBERON:0003487;2.05e-15;2!UBERON:0001820;2.05e-15;2!UBERON:0000486;2.13e-10;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.44e-23,5;UBERON:0005910,7.84e-20,6;UBERON:0002419,2.37e-15,2;UBERON:0007771,2.37e-15,2;UBERON:0003297,2.37e-15,2;UBERON:0001821,2.37e-15,2;UBERON:0003487,2.37e-15,2;UBERON:0001820,2.37e-15,2;UBERON:0005089,2.37e-15,2;UBERON:0005088,2.37e-15,2 | |||
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| ||
|short_description=p5@RAET1E | |||
}} | }} |
Latest revision as of 03:06, 16 September 2015
Short description: | p5@RAET1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAET1E_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000532335, NM_001243328, uc003qnj.2_5end |
EntrezGene: | RAET1E |
HGNC: | 16793 |
UniProt: | Q8TD07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.65e-29 | 4 |
urothelial cell | 3.65e-29 | 4 |
sebum secreting cell | 2.37e-15 | 2 |
epithelial cell of sweat gland | 2.37e-15 | 2 |
epithelial cell of skin gland | 2.37e-15 | 2 |
acinar cell of sebaceous gland | 2.37e-15 | 2 |
acinar cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.44e-23 | 5 |
transitional epithelium | 7.84e-20 | 6 |
skin gland | 2.37e-15 | 2 |
epidermis gland | 2.37e-15 | 2 |
gland of integumental system | 2.37e-15 | 2 |
sebaceous gland | 2.37e-15 | 2 |
skin sebaceous gland | 2.37e-15 | 2 |
sweat gland | 2.37e-15 | 2 |
sweat gland placode | 2.37e-15 | 2 |
sebaceous gland placode | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.20e-10 | 3 |
non-small cell lung carcinoma | 6.77e-07 | 5 |