FFCP PHASE1:Hg19::chr1:228285546..228285565,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:228285546..228285565,+ to FFCP PHASE1:Hg19::chr1:228285546..228285565,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=375 | |EntrezGene=375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=652 | |HGNC=652 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-121bp_to_BC010415_5end | |||
|cluster_id=chr1:228285546..228285565,+ | |||
|description=CAGE_peak_6_at_ARF1_5end | |||
|id=chr1:228285546..228285565,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-09!42;CL:0000860!7.66e-08!45;CL:0000766!1.21e-07!76;CL:0002194!5.59e-07!63;CL:0000576!5.59e-07!63;CL:0000040!5.59e-07!63;CL:0000559!5.59e-07!63;CL:0000839!9.12e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.41e-16;33!CL:0002057;2.41e-16;33!CL:0000473;3.61e-15;39!CL:0000234;3.61e-15;39!CL:0000576;2.64e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.36e-13,48;CL:0000234,1.36e-13,48;CL:0000860,2.12e-12,42;CL:0002057,2.12e-12,42;CL:0000766,1.05e-09,72;CL:0002194,1.24e-09,59;CL:0000576,1.24e-09,59;CL:0000040,1.24e-09,59;CL:0000559,1.24e-09,59;CL:0000839,4.22e-09,66;CL:0002009,5.08e-09,61;CL:0000557,7.97e-09,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.02e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.34e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.53e-09,76;UBERON:0002204,1.63e-08,167;UBERON:0003081,2.05e-08,203;UBERON:0000926,2.58e-08,315;UBERON:0004120,2.58e-08,315;UBERON:0006603,2.58e-08,315;UBERON:0001474,1.97e-07,82 | |||
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| ||
|short_description=p6@ARF1 | |||
}} | }} |
Latest revision as of 03:06, 16 September 2015
Short description: | p6@ARF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -121bp_to_BC010415_5end |
EntrezGene: | ARF1 |
HGNC: | 652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.36e-13 | 48 |
phagocyte | 1.36e-13 | 48 |
classical monocyte | 2.12e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.12e-12 | 42 |
myeloid leukocyte | 1.05e-09 | 72 |
monopoietic cell | 1.24e-09 | 59 |
monocyte | 1.24e-09 | 59 |
monoblast | 1.24e-09 | 59 |
promonocyte | 1.24e-09 | 59 |
myeloid lineage restricted progenitor cell | 4.22e-09 | 66 |
macrophage dendritic cell progenitor | 5.08e-09 | 61 |
granulocyte monocyte progenitor cell | 7.97e-09 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.53e-09 | 76 |
musculoskeletal system | 1.63e-08 | 167 |
lateral plate mesoderm | 2.05e-08 | 203 |
mesoderm | 2.58e-08 | 315 |
mesoderm-derived structure | 2.58e-08 | 315 |
presumptive mesoderm | 2.58e-08 | 315 |
bone element | 1.97e-07 | 82 |