FFCP PHASE1:Hg19::chr4:152682129..152682170,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5188 | |EntrezGene=5188 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8849 | |HGNC=8849 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGY4,D6RDU9,D6REA0 | |UniProt=D6RGY4,D6RDU9,D6REA0 | ||
|association_with_transcript=0bp_to_ENST00000508611,ENST00000512306,ENST00000515812,uc003iml.2,uc003imm.3_5end | |association_with_transcript=0bp_to_ENST00000508611,ENST00000512306,ENST00000515812,uc003iml.2,uc003imm.3_5end | ||
|cluster_id=chr4:152682129..152682170,- | |||
|description=CAGE_peak_1_at_PET112_5end | |description=CAGE_peak_1_at_PET112_5end | ||
|id=chr4:152682129..152682170,- | |id=chr4:152682129..152682170,- | ||
|ontology_enrichment_celltype=CL:0000183!5.22e-07!59 | |ontology_enrichment_celltype=CL:0000183!5.22e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.53e-13!312;UBERON:0000483!3.48e-13!309;UBERON:0000481!5.15e-13!347;UBERON:0000475!1.53e-09!365;UBERON:0000064!2.62e-08!219;UBERON:0000025!5.12e-08!194;UBERON:0000914!5.58e-08!83;UBERON:0002329!5.58e-08!83;UBERON:0003077!5.58e-08!83;UBERON:0003059!5.58e-08!83;UBERON:0007282!5.58e-08!83;UBERON:0009618!5.58e-08!83;UBERON:0007285!5.58e-08!83;UBERON:0004290!1.30e-07!70;UBERON:0000486!2.40e-07!82;UBERON:0001134!3.66e-07!61;UBERON:0002036!3.66e-07!61;UBERON:0003082!3.66e-07!61;UBERON:0000477!4.94e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,4.87e-14,309;UBERON:0000483,6.72e-14,306;UBERON:0007503,4.77e-09,78;UBERON:0003077,5.70e-08,72;UBERON:0007285,5.70e-08,72;UBERON:0010314,7.01e-08,132;UBERON:0000025,7.09e-08,192;UBERON:0007524,7.73e-08,73;UBERON:0002329,9.09e-08,71;UBERON:0003059,9.09e-08,71;UBERON:0007282,9.09e-08,71;UBERON:0004290,9.09e-08,71;UBERON:0009618,9.09e-08,71;UBERON:0010371,9.78e-08,104;UBERON:0000486,1.70e-07,83;UBERON:0001134,2.57e-07,62;UBERON:0002036,2.57e-07,62;UBERON:0003082,2.57e-07,62;UBERON:0003075,3.38e-07,82;UBERON:0007284,3.38e-07,82;UBERON:0002346,3.92e-07,86 | |||
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| ||
|short_description=p1@PET112 | |short_description=p1@PET112 | ||
}} | }} |
Latest revision as of 02:56, 16 September 2015
Short description: | p1@PET112 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PET112_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508611, ENST00000512306, ENST00000515812, uc003iml.2, uc003imm.3_5end |
EntrezGene: | PET112 |
HGNC: | 8849 |
UniProt: | D6RGY4D6RDU9D6REA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell layer | 4.87e-14 | 309 |
epithelium | 6.72e-14 | 306 |
epithelial vesicle | 4.77e-09 | 78 |
paraxial mesoderm | 5.70e-08 | 72 |
presumptive paraxial mesoderm | 5.70e-08 | 72 |
structure with developmental contribution from neural crest | 7.01e-08 | 132 |
tube | 7.09e-08 | 192 |
dense mesenchyme tissue | 7.73e-08 | 73 |
somite | 9.09e-08 | 71 |
presomitic mesoderm | 9.09e-08 | 71 |
presumptive segmental plate | 9.09e-08 | 71 |
dermomyotome | 9.09e-08 | 71 |
trunk paraxial mesoderm | 9.09e-08 | 71 |
ecto-epithelium | 9.78e-08 | 104 |
multilaminar epithelium | 1.70e-07 | 83 |
skeletal muscle tissue | 2.57e-07 | 62 |
striated muscle tissue | 2.57e-07 | 62 |
myotome | 2.57e-07 | 62 |
neural plate | 3.38e-07 | 82 |
presumptive neural plate | 3.38e-07 | 82 |
neurectoderm | 3.92e-07 | 86 |