FFCP PHASE1:Hg19::chr12:96184432..96184454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=59277 | |EntrezGene=59277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13658 | |HGNC=13658 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HB63 | |UniProt=Q9HB63 | ||
|association_with_transcript=81bp_to_ENST00000343702,NM_021229,uc001tei.2,uc009ztf.2_5end | |association_with_transcript=81bp_to_ENST00000343702,NM_021229,uc001tei.2,uc009ztf.2_5end | ||
|cluster_id=chr12:96184432..96184454,- | |||
|description=CAGE_peak_4_at_NTN4_5end | |description=CAGE_peak_4_at_NTN4_5end | ||
|id=chr12:96184432..96184454,- | |id=chr12:96184432..96184454,- | ||
|ontology_enrichment_celltype=CL:0000066!1.00e-09!254;CL:0000222!2.68e-08!119;CL:0000220!1.99e-07!246;CL:0002321!3.80e-07!248;CL:0002139!6.35e-07!24 | |ontology_enrichment_celltype=CL:0000066!1.00e-09!254;CL:0000222!2.68e-08!119;CL:0000220!1.99e-07!246;CL:0002321!3.80e-07!248;CL:0002139!6.35e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.78e-08;24 | |ontology_enrichment_celltype_v019=CL:0002139;2.78e-08;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.16e-09,121;CL:0002139,3.47e-08,24;CL:0002078,2.55e-07,45;CL:0000213,4.22e-07,58;CL:0000215,4.22e-07,58 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!4.59e-17!286;UBERON:0000481!1.16e-16!347;UBERON:0004111!7.19e-15!241;UBERON:0000467!2.30e-14!625;UBERON:0000480!4.03e-14!626;UBERON:0000468!4.13e-13!659;UBERON:0003104!6.21e-13!238;UBERON:0009142!6.21e-13!238;UBERON:0000475!1.25e-12!365;UBERON:0002100!1.77e-12!216;UBERON:0003914!3.53e-12!118;UBERON:0000483!4.81e-12!309;UBERON:0000119!1.03e-11!312;UBERON:0004872!9.99e-11!84;UBERON:0004119!1.10e-10!169;UBERON:0000925!1.10e-10!169;UBERON:0006595!1.10e-10!169;UBERON:0000055!3.06e-10!69;UBERON:0002049!1.85e-09!79;UBERON:0007798!1.85e-09!79;UBERON:0003103!2.69e-09!69;UBERON:0001007!2.83e-09!155;UBERON:0001555!2.83e-09!155;UBERON:0007026!2.83e-09!155;UBERON:0001981!7.67e-09!60;UBERON:0007500!7.67e-09!60;UBERON:0004537!7.67e-09!60;UBERON:0006965!7.67e-09!60;UBERON:0005256!1.74e-08!143;UBERON:0000025!4.47e-08!194;UBERON:0000923!6.98e-08!604;UBERON:0005291!6.98e-08!604;UBERON:0006598!6.98e-08!604;UBERON:0002532!6.98e-08!604;UBERON:0001009!1.00e-07!113;UBERON:0002050!1.05e-07!605;UBERON:0005423!1.05e-07!605;UBERON:0007100!2.10e-07!27;UBERON:0000922!3.25e-07!612;UBERON:0004923!4.28e-07!57;UBERON:0000464!4.60e-07!104;UBERON:0000466!4.91e-07!126;UBERON:0000062!5.46e-07!511;UBERON:0000926!6.57e-07!448;UBERON:0004120!6.57e-07!448;UBERON:0006603!6.57e-07!448;UBERON:0002553!7.10e-07!70;UBERON:0000490!7.45e-07!138;UBERON:0004535!8.85e-07!110 | |ontology_enrichment_uberon=UBERON:0000477!4.59e-17!286;UBERON:0000481!1.16e-16!347;UBERON:0004111!7.19e-15!241;UBERON:0000467!2.30e-14!625;UBERON:0000480!4.03e-14!626;UBERON:0000468!4.13e-13!659;UBERON:0003104!6.21e-13!238;UBERON:0009142!6.21e-13!238;UBERON:0000475!1.25e-12!365;UBERON:0002100!1.77e-12!216;UBERON:0003914!3.53e-12!118;UBERON:0000483!4.81e-12!309;UBERON:0000119!1.03e-11!312;UBERON:0004872!9.99e-11!84;UBERON:0004119!1.10e-10!169;UBERON:0000925!1.10e-10!169;UBERON:0006595!1.10e-10!169;UBERON:0000055!3.06e-10!69;UBERON:0002049!1.85e-09!79;UBERON:0007798!1.85e-09!79;UBERON:0003103!2.69e-09!69;UBERON:0001007!2.83e-09!155;UBERON:0001555!2.83e-09!155;UBERON:0007026!2.83e-09!155;UBERON:0001981!7.67e-09!60;UBERON:0007500!7.67e-09!60;UBERON:0004537!7.67e-09!60;UBERON:0006965!7.67e-09!60;UBERON:0005256!1.74e-08!143;UBERON:0000025!4.47e-08!194;UBERON:0000923!6.98e-08!604;UBERON:0005291!6.98e-08!604;UBERON:0006598!6.98e-08!604;UBERON:0002532!6.98e-08!604;UBERON:0001009!1.00e-07!113;UBERON:0002050!1.05e-07!605;UBERON:0005423!1.05e-07!605;UBERON:0007100!2.10e-07!27;UBERON:0000922!3.25e-07!612;UBERON:0004923!4.28e-07!57;UBERON:0000464!4.60e-07!104;UBERON:0000466!4.91e-07!126;UBERON:0000062!5.46e-07!511;UBERON:0000926!6.57e-07!448;UBERON:0004120!6.57e-07!448;UBERON:0006603!6.57e-07!448;UBERON:0002553!7.10e-07!70;UBERON:0000490!7.45e-07!138;UBERON:0004535!8.85e-07!110 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.05e-08;25!UBERON:0001637;6.19e-07;42!UBERON:0003509;6.19e-07;42!UBERON:0004572;6.19e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0007100;9.05e-08;25!UBERON:0001637;6.19e-07;42!UBERON:0003509;6.19e-07;42!UBERON:0004572;6.19e-07;42 | ||
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|phase1_expression=1.2717486548939,0.856402095563933,1.9733616573436,2.00146596706261,1.34088328328186,5.23403114460221,2.53299878168311,0.631719873426831,0.783556884599516,0,0,1.52908960491121,2.11013582582763,2.47532705920093,1.98838425436749,0,0,0,0,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.821246550437305,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,2.43806866313962,0,2.30152611318355,9.75885711438329,8.02140657017423,6.66293987219789,3.1811437882044,3.89307896242109,1.51255707462509,1.99556457716308,0.702678285545008,1.37528029272598,0,0.741568885568859,0,0,0,0,0,0,1.39133685156694,0,3.47140501607594,1.69592382577203,2.51699661725944,4.40188867104108,1.46296476575767,3.6178346283706,4.98072767761394,7.02913286805807,1.20848795132744,4.56163263431108,4.14905497831888,1.47065232138347,4.86085168729056,3.12549048994279,1.12264686313085,1.57656072676651,0,1.89853131913626,0.916008719652036,0,0,0.436094052142534,15.4061305025549,3.54565432660823,1.45650098894541,5.16305917347865,4.25602058638028,5.04609840128076,0,3.7000132262574,0.933633106199299,1.21239604862719,0.326923806226917,0,0,0,1.24864030732128,2.2818872861778,2.24173020827702,0.23486899728753,0,0.140450806702248,2.44985005505872,0.245668634623536,4.54633437173368,0,1.97813543422845,0.910161361938026,0,1.17835279767846,1.25118519871964,1.93944880838928,3.07284334616587,3.98434134538726,3.60571341375832,3.17610112848059,1.4351170855109,3.84403299873421,0.423863802319124,0.600182192168805,0.206105058476878,2.06112432036503,4.28068769562657,0.337552664482532,0.292311015483596,0.252433774244115,0.736399189138395,3.55621325001386,1.77504796258307,0.302256294682921,1.69560592310488,0.773043412653187,1.63647672354501,1.14721838155602,0,0.132529768321485,0,0,0,0,0,1.28648187638577,0,0.464367928031979,5.77503585335668,1.0647612003586,1.01150814046861,0,0.772057809126758,0.217879444092406,1.18635309555548,0.134831308160164,1.17732879075208,0.38474715694639,1.4763109092493,0,0,0,0,0.982827216677626,2.95394953340702,0,0.737930631258681,1.20097467208968,0.768251997860379,1.1240175325762,0.502644862058154,1.11106134190236,0.977424915930974,1.03993478527958,1.44331342025273,0.34779121492523,1.40890433082986,3.17606185074362,3.24089858803628,3.04406643575357,0,0,0,0,0,0.93733833986777,1.34385702559088,0.283550194484773,2.50763863567975,0.581267877027924,1.53353071666084,0,0,0.414656231081544,0,0.25248486685276,0,0.381988425558278,0,0,0.102827492703324,0,0,0.224262168690721,0,0.5867062865676,0.258543431515556,0,0.845302752556,4.25500986535793,4.16029747645464,0,0,0,1.28680194292333,0,0,0.325736184293735,0,0,1.50719688529793,0,1.09970290300263,0,0,0,5.99062138728957,6.89171615004683,2.85273810081437,4.48822050669496,2.26023954805422,1.61154866915906,0,0,0.215627574859517,0,0,0,0.773288812777695,0,0,0,0,0,1.96306386750624,0.500170521059677,2.71265023699736,6.86303843051664,3.39015078714607,2.83864347061082,3.04567678981054,1.20378439891088,0,5.17365356462525,2.65690239414175,2.94990669666725,2.95404289191482,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,1.48864684691266,0.306923946576125,0.841980283299221,3.84417447767103,2.04682899626681,4.66476371316462,2.96836132889982,0,0.177561725313127,0.410635780069046,3.11552657510173,0.464841513839837,0.120859449591622,3.40860999515584,2.11786274552562,1.95184561879831,1.82091168006717,3.2781103739856,1.80479845162965,3.77375151811632,0.784349769176855,1.46139224653261,2.53323909342902,2.27466768141793,1.70093705276516,3.23873874153209,4.62681758070868,0.812839312631559,0.501689773854853,1.52925763827023,3.3243040357149,1.34324852833307,0,0,1.53870075069834,0.984043937099117,2.27764876265012,1.44257416306811,0.54941678891006,0.495056999523528,1.14853107599234,0,1.6068392984416,1.93341436584244,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0.145016693914229,1.10794615640931,1.4245125703478,2.31398881505369,4.99694175149276,1.91419068741876,3.94515345336645,0.464845549297286,4.09256050879832,0.6970372701606,4.92853728281742,2.66153015158511,0,1.29726953372744,4.29374660225974,0,2.84741482246853,2.66882271493355,0,0,2.54562598340749,0.78494864019923,0.179872457583315,0,0.471249609382746,1.2130948894399,3.17020642346017,1.68503382495592,0,5.11798328225697,0,1.77449884830381,1.27264888758341,1.13008116620243,3.85955740482287,3.3171948762061,1.75380354101505,0,1.9676842561399,1.82619339266434,1.8589409885985,0.845086807596724,0,0.294747123039363,1.07001315444375,0,10.1331664942879,7.57378253807774,0,0,1.44333169088268,1.34060455107157,1.08890984861323,1.88287601553558,0.86101074534246,1.68471475667626,3.99087138183008,6.43225520579487,0,0,0,0,0,0,0,0,0.534120355637366,0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| ||
|short_description=p4@NTN4 | |short_description=p4@NTN4 | ||
}} | }} |
Latest revision as of 02:51, 16 September 2015
Short description: | p4@NTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 81bp_to_ENST00000343702, NM_021229, uc001tei.2, uc009ztf.2_5end |
EntrezGene: | NTN4 |
HGNC: | 13658 |
UniProt: | Q9HB63 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.16e-09 | 121 |
endothelial cell of vascular tree | 3.47e-08 | 24 |
meso-epithelial cell | 2.55e-07 | 45 |
lining cell | 4.22e-07 | 58 |
barrier cell | 4.22e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.28e-13 | 117 |
splanchnic layer of lateral plate mesoderm | 8.54e-12 | 83 |
vessel | 1.08e-11 | 68 |
vasculature | 3.88e-11 | 78 |
vascular system | 3.88e-11 | 78 |
trunk | 2.62e-10 | 199 |
compound organ | 4.62e-10 | 68 |
epithelial tube open at both ends | 5.15e-10 | 59 |
blood vessel | 5.15e-10 | 59 |
blood vasculature | 5.15e-10 | 59 |
vascular cord | 5.15e-10 | 59 |
circulatory system | 6.75e-10 | 112 |
anatomical conduit | 8.10e-10 | 240 |
cardiovascular system | 1.12e-08 | 109 |
primary circulatory organ | 4.27e-08 | 27 |
artery | 1.11e-07 | 42 |
arterial blood vessel | 1.11e-07 | 42 |
arterial system | 1.11e-07 | 42 |
mesenchyme | 1.16e-07 | 160 |
entire embryonic mesenchyme | 1.16e-07 | 160 |
endoderm-derived structure | 5.15e-07 | 160 |
endoderm | 5.15e-07 | 160 |
presumptive endoderm | 5.15e-07 | 160 |
epithelium | 5.60e-07 | 306 |