FFCP PHASE1:Hg19::chr8:126104060..126104071,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=286053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26513 | |||
|TSSclassifier=strong | |||
|UniProt=Q96MF7 | |||
|association_with_transcript=-11bp_to_NM_173685,uc003yrv.2,uc003yrw.2_5end | |||
|cluster_id=chr8:126104060..126104071,+ | |||
|description=CAGE_peak_2_at_NSMCE2_5end | |||
|id=chr8:126104060..126104071,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.58e-13!65;CL:0002194!7.93e-13!63;CL:0000576!7.93e-13!63;CL:0000040!7.93e-13!63;CL:0000559!7.93e-13!63;CL:0000766!1.09e-12!76;CL:0000839!1.37e-12!70;CL:0000860!5.00e-12!45;CL:0000557!1.29e-11!71;CL:0002057!1.42e-11!42;CL:0000763!8.46e-11!112;CL:0000049!8.46e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.06e-14;33!CL:0002057;2.06e-14;33!CL:0000473;9.27e-13;39!CL:0000234;9.27e-13;39!CL:0000576;1.34e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.10e-16,61;CL:0002194,5.81e-15,59;CL:0000576,5.81e-15,59;CL:0000040,5.81e-15,59;CL:0000559,5.81e-15,59;CL:0000766,8.31e-15,72;CL:0000839,1.49e-14,66;CL:0000473,4.00e-14,48;CL:0000234,4.00e-14,48;CL:0000557,1.03e-13,67;CL:0000763,8.62e-13,108;CL:0000049,8.62e-13,108;CL:0000860,9.38e-13,42;CL:0002057,9.38e-13,42 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.28e-10!101;UBERON:0001434!1.28e-10!101;UBERON:0001474!8.05e-10!86;UBERON:0002371!1.06e-09!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.06e-12,82;UBERON:0001434,4.67e-12,100;UBERON:0002371,5.35e-12,76;UBERON:0004765,3.58e-11,90;UBERON:0002405,2.72e-09,93;UBERON:0002390,3.80e-08,98;UBERON:0003061,3.80e-08,98;UBERON:0002193,3.57e-07,108;UBERON:0001737,4.24e-07,9 | |||
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| |||
|short_description=p2@NSMCE2 | |||
}} |
Latest revision as of 02:49, 16 September 2015
Short description: | p2@NSMCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NSMCE2_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_NM_173685, uc003yrv.2, uc003yrw.2_5end |
EntrezGene: | NSMCE2 |
HGNC: | 26513 |
UniProt: | Q96MF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 7.10e-16 | 61 |
monopoietic cell | 5.81e-15 | 59 |
monocyte | 5.81e-15 | 59 |
monoblast | 5.81e-15 | 59 |
promonocyte | 5.81e-15 | 59 |
myeloid leukocyte | 8.31e-15 | 72 |
myeloid lineage restricted progenitor cell | 1.49e-14 | 66 |
defensive cell | 4.00e-14 | 48 |
phagocyte | 4.00e-14 | 48 |
granulocyte monocyte progenitor cell | 1.03e-13 | 67 |
myeloid cell | 8.62e-13 | 108 |
common myeloid progenitor | 8.62e-13 | 108 |
classical monocyte | 9.38e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.38e-13 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.06e-12 | 82 |
skeletal system | 4.67e-12 | 100 |
bone marrow | 5.35e-12 | 76 |
skeletal element | 3.58e-11 | 90 |
immune system | 2.72e-09 | 93 |
hematopoietic system | 3.80e-08 | 98 |
blood island | 3.80e-08 | 98 |
hemolymphoid system | 3.57e-07 | 108 |
larynx | 4.24e-07 | 9 |