FFCP PHASE1:Hg19::chr10:104678290..104678316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54805 | |EntrezGene=54805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=103 | |HGNC=103 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8M5 | |UniProt=Q9H8M5 | ||
|association_with_transcript=176bp_to_AK023479_5end | |association_with_transcript=176bp_to_AK023479_5end | ||
|cluster_id=chr10:104678290..104678316,+ | |||
|description=CAGE_peak_2_at_CNNM2_5end | |description=CAGE_peak_2_at_CNNM2_5end | ||
|id=chr10:104678290..104678316,+ | |id=chr10:104678290..104678316,+ | ||
|ontology_enrichment_celltype=CL:0000791!4.60e-07!18;CL:0000789!4.60e-07!18;CL:0002420!4.60e-07!18;CL:0002419!4.60e-07!18;CL:0000790!4.60e-07!18 | |ontology_enrichment_celltype=CL:0000791!4.60e-07!18;CL:0000789!4.60e-07!18;CL:0002420!4.60e-07!18;CL:0002419!4.60e-07!18;CL:0000790!4.60e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.27e-07;18!CL:0000789;7.27e-07;18!CL:0002419;7.27e-07;18 | |ontology_enrichment_celltype_v019=CL:0000791;7.27e-07;18!CL:0000789;7.27e-07;18!CL:0002419;7.27e-07;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.54e-07,18;CL:0000789,2.54e-07,18;CL:0002420,2.54e-07,18;CL:0002419,2.54e-07,18;CL:0000790,2.54e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;7.27e-07;18 | |ontology_enrichment_development_v019=CL:0000790;7.27e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.04e-24!115;UBERON:0001049!4.38e-16!57;UBERON:0005068!4.38e-16!57;UBERON:0006241!4.38e-16!57;UBERON:0007135!4.38e-16!57;UBERON:0002780!8.40e-15!41;UBERON:0001890!8.40e-15!41;UBERON:0006240!8.40e-15!41;UBERON:0001017!1.66e-14!82;UBERON:0005743!3.40e-14!86;UBERON:0000073!4.21e-14!94;UBERON:0001016!4.21e-14!94;UBERON:0003080!4.66e-14!42;UBERON:0000955!6.89e-13!69;UBERON:0006238!6.89e-13!69;UBERON:0001893!2.19e-12!34;UBERON:0002020!2.92e-12!34;UBERON:0003528!2.92e-12!34;UBERON:0002616!3.78e-12!59;UBERON:0002791!6.34e-12!33;UBERON:0001869!6.92e-12!32;UBERON:0001950!1.93e-10!20;UBERON:0002619!6.90e-10!22;UBERON:0003075!6.80e-09!86;UBERON:0007284!6.80e-09!86;UBERON:0000956!8.39e-09!25;UBERON:0000203!8.39e-09!25;UBERON:0002346!1.32e-08!90;UBERON:0003056!2.62e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.04e-24!115;UBERON:0001049!4.38e-16!57;UBERON:0005068!4.38e-16!57;UBERON:0006241!4.38e-16!57;UBERON:0007135!4.38e-16!57;UBERON:0002780!8.40e-15!41;UBERON:0001890!8.40e-15!41;UBERON:0006240!8.40e-15!41;UBERON:0001017!1.66e-14!82;UBERON:0005743!3.40e-14!86;UBERON:0000073!4.21e-14!94;UBERON:0001016!4.21e-14!94;UBERON:0003080!4.66e-14!42;UBERON:0000955!6.89e-13!69;UBERON:0006238!6.89e-13!69;UBERON:0001893!2.19e-12!34;UBERON:0002020!2.92e-12!34;UBERON:0003528!2.92e-12!34;UBERON:0002616!3.78e-12!59;UBERON:0002791!6.34e-12!33;UBERON:0001869!6.92e-12!32;UBERON:0001950!1.93e-10!20;UBERON:0002619!6.90e-10!22;UBERON:0003075!6.80e-09!86;UBERON:0007284!6.80e-09!86;UBERON:0000956!8.39e-09!25;UBERON:0000203!8.39e-09!25;UBERON:0002346!1.32e-08!90;UBERON:0003056!2.62e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.95e-11;34!UBERON:0001869;7.59e-11;32!UBERON:0001950;8.42e-11;20!UBERON:0002780;8.59e-11;41!UBERON:0001890;8.59e-11;41!UBERON:0003528;1.09e-10;34!UBERON:0002020;1.09e-10;34!UBERON:0002791;1.25e-10;32!UBERON:0002619;5.20e-10;22!UBERON:0000073;9.06e-10;53!UBERON:0002616;9.06e-10;53!UBERON:0000956;7.62e-09;25!UBERON:0000203;7.62e-09;25!UBERON:0007023;4.53e-08;114!UBERON:0001017;1.22e-07;75!UBERON:0000955;1.31e-07;68!UBERON:0001016;8.16e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0001893;6.95e-11;34!UBERON:0001869;7.59e-11;32!UBERON:0001950;8.42e-11;20!UBERON:0002780;8.59e-11;41!UBERON:0001890;8.59e-11;41!UBERON:0003528;1.09e-10;34!UBERON:0002020;1.09e-10;34!UBERON:0002791;1.25e-10;32!UBERON:0002619;5.20e-10;22!UBERON:0000073;9.06e-10;53!UBERON:0002616;9.06e-10;53!UBERON:0000956;7.62e-09;25!UBERON:0000203;7.62e-09;25!UBERON:0007023;4.53e-08;114!UBERON:0001017;1.22e-07;75!UBERON:0000955;1.31e-07;68!UBERON:0001016;8.16e-07;83 | ||
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| ||
|short_description=p2@CNNM2 | |short_description=p2@CNNM2 | ||
}} | }} |
Latest revision as of 02:46, 16 September 2015
Short description: | p2@CNNM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CNNM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 176bp_to_AK023479_5end |
EntrezGene: | CNNM2 |
HGNC: | 103 |
UniProt: | Q9H8M5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.54e-07 | 18 |
alpha-beta T cell | 2.54e-07 | 18 |
immature T cell | 2.54e-07 | 18 |
mature T cell | 2.54e-07 | 18 |
immature alpha-beta T cell | 2.54e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.33e-25 | 114 |
neural tube | 1.14e-17 | 56 |
neural rod | 1.14e-17 | 56 |
future spinal cord | 1.14e-17 | 56 |
neural keel | 1.14e-17 | 56 |
regional part of nervous system | 5.20e-17 | 53 |
regional part of brain | 5.20e-17 | 53 |
central nervous system | 6.78e-16 | 81 |
nervous system | 1.57e-15 | 89 |
regional part of forebrain | 2.09e-15 | 41 |
forebrain | 2.09e-15 | 41 |
anterior neural tube | 2.09e-15 | 41 |
future forebrain | 2.09e-15 | 41 |
organ system subdivision | 2.74e-14 | 223 |
brain | 3.92e-14 | 68 |
future brain | 3.92e-14 | 68 |
telencephalon | 7.04e-13 | 34 |
brain grey matter | 9.53e-13 | 34 |
gray matter | 9.53e-13 | 34 |
cerebral hemisphere | 2.35e-12 | 32 |
regional part of telencephalon | 4.88e-12 | 32 |
neural plate | 3.25e-11 | 82 |
presumptive neural plate | 3.25e-11 | 82 |
neocortex | 7.44e-11 | 20 |
neurectoderm | 1.28e-10 | 86 |
regional part of cerebral cortex | 2.82e-10 | 22 |
cerebral cortex | 3.97e-09 | 25 |
pallium | 3.97e-09 | 25 |
pre-chordal neural plate | 6.72e-09 | 61 |