FFCP PHASE1:Hg19::chr20:36713497..36713503,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58490 | |EntrezGene=58490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16209 | |HGNC=16209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-274bp_to_ENST00000484683_5end | |association_with_transcript=-274bp_to_ENST00000484683_5end | ||
|cluster_id=chr20:36713497..36713503,+ | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_19_at_RPRD1B_5end | |description=CAGE_peak_19_at_RPRD1B_5end | ||
|id=chr20:36713497..36713503,+ | |id=chr20:36713497..36713503,+ | ||
|ontology_enrichment_celltype=CL:0000064!4.68e-16!3;CL:0005012!4.68e-16!3;CL:0000067!4.68e-16!3;CL:0002304!4.68e-16!3;CL:0002504!8.15e-16!3;CL:1000279!8.15e-16!3;CL:1000280!8.15e-16!3;CL:0002588!7.45e-11!2;CL:0002195!9.55e-11!2;CL:0002571!9.55e-11!2 | |ontology_enrichment_celltype=CL:0000064!4.68e-16!3;CL:0005012!4.68e-16!3;CL:0000067!4.68e-16!3;CL:0002304!4.68e-16!3;CL:0002504!8.15e-16!3;CL:1000279!8.15e-16!3;CL:1000280!8.15e-16!3;CL:0002588!7.45e-11!2;CL:0002195!9.55e-11!2;CL:0002571!9.55e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000064;1.64e-38;3!CL:0000067;1.64e-38;3!CL:0005012;1.64e-38;3!CL:0002304;1.64e-38;3!CL:0002097;1.15e-15;2!CL:0000174;6.73e-11;3!CL:0000075;3.81e-10;27!CL:0000306;2.35e-08;4!CL:0002222;2.35e-08;4!CL:0002224;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.49e-38,3;CL:0000067,1.49e-38,3;CL:0005012,1.49e-38,3;CL:0002304,1.49e-38,3;CL:0002097,1.15e-15,2;CL:0000174,6.73e-11,3;CL:0000075,3.93e-10,27;CL:0000306,2.61e-08,4;CL:0002222,2.61e-08,4;CL:0002224,2.61e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.33e-29;1!UBERON:0010227;2.73e-29;1!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.15e-20!4;UBERON:0001778!4.68e-16!3;UBERON:0001775!4.68e-16!3;UBERON:0002203!1.20e-13!6;UBERON:0001768!1.20e-13!6;UBERON:0007625!2.32e-11!11;UBERON:0002200!2.70e-11!11;UBERON:0006876!2.70e-11!11;UBERON:0001155!5.95e-09!9;UBERON:0001801!7.27e-09!14;UBERON:0004151!4.92e-08!3;UBERON:0000059!2.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.64e-38;3!UBERON:0001775;1.64e-38;3!UBERON:0004151;1.98e-38;3!UBERON:0002084;1.33e-29;1!UBERON:0002082;1.33e-29;1!UBERON:0002079;2.73e-29;1!UBERON:0002135;2.73e-29;1!UBERON:0000488;3.40e-29;4!UBERON:0007625;9.02e-24;11!UBERON:0002203;7.48e-20;6!UBERON:0001768;7.48e-20;6!UBERON:0002200;7.48e-20;6!UBERON:0001801;7.32e-19;14!UBERON:0002081;2.21e-15;2!UBERON:0002133;2.21e-15;2!UBERON:0000019;4.14e-14;19!UBERON:0000047;4.14e-14;19!UBERON:0004088;4.14e-14;19!UBERON:0010230;4.14e-14;19!UBERON:0000970;1.92e-13;20!UBERON:0002104;7.73e-13;21!UBERON:0001456;7.73e-13;21!UBERON:0000948;2.85e-12;22!UBERON:0000020;8.72e-12;23!UBERON:0001032;2.52e-11;24!UBERON:0004456;2.52e-11;24!UBERON:0006876;2.62e-11;11!UBERON:0002369;6.73e-11;3!UBERON:0001235;6.73e-11;3!UBERON:0006858;6.73e-11;3!UBERON:0007100;6.92e-11;25!UBERON:0003978;1.04e-10;3!UBERON:0000946;1.04e-10;3!UBERON:0010371;9.48e-09;31!UBERON:0010077;2.35e-08;4!UBERON:0005389;2.35e-08;4!UBERON:0000484;2.35e-08;4!UBERON:0000965;2.35e-08;4!UBERON:0001803;2.35e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.49e-38,3;UBERON:0001775,1.49e-38,3;UBERON:0004151,2.18e-38,3;UBERON:0002084,1.33e-29,1;UBERON:0002082,1.33e-29,1;UBERON:0010226,1.33e-29,1;UBERON:0002135,1.78e-29,1;UBERON:0002079,3.16e-29,1;UBERON:0000488,3.16e-29,4;UBERON:0007625,9.75e-24,11;UBERON:0002203,7.13e-20,6;UBERON:0001768,7.13e-20,6;UBERON:0002200,7.13e-20,6;UBERON:0001801,7.78e-19,14;UBERON:0002133,1.78e-15,2;UBERON:0002081,2.37e-15,2;UBERON:0010227,2.37e-15,2;UBERON:0000019,2.01e-13,20;UBERON:0000047,2.01e-13,20;UBERON:0010312,2.01e-13,20;UBERON:0004088,2.01e-13,20;UBERON:0010230,2.01e-13,20;UBERON:0003072,2.01e-13,20;UBERON:0004128,2.01e-13,20;UBERON:0003071,2.01e-13,20;UBERON:0000970,8.05e-13,21;UBERON:0002104,8.05e-13,21;UBERON:0001456,2.85e-12,22;UBERON:0000948,2.52e-11,24;UBERON:0005498,2.52e-11,24;UBERON:0004140,2.52e-11,24;UBERON:0009881,2.52e-11,24;UBERON:0004141,2.52e-11,24;UBERON:0003084,2.52e-11,24;UBERON:0007005,2.52e-11,24;UBERON:0004139,2.52e-11,24;UBERON:0004291,2.52e-11,24;UBERON:0006876,2.55e-11,11;UBERON:0000020,2.61e-11,24;UBERON:0001032,2.61e-11,24;UBERON:0004456,2.61e-11,24;UBERON:0002369,6.73e-11,3;UBERON:0001235,6.73e-11,3;UBERON:0006858,6.73e-11,3;UBERON:0003978,8.99e-11,3;UBERON:0009751,8.99e-11,3;UBERON:0000946,8.99e-11,3;UBERON:0002523,8.99e-11,3;UBERON:0005983,8.99e-11,3;UBERON:0002165,8.99e-11,3;UBERON:0002062,8.99e-11,3;UBERON:0007280,8.99e-11,3;UBERON:0010314,1.24e-10,132;UBERON:0007100,3.81e-10,27;UBERON:0005085,6.52e-09,31;UBERON:0010077,2.61e-08,4;UBERON:0005389,2.61e-08,4;UBERON:0000484,2.61e-08,4;UBERON:0002546,2.61e-08,4;UBERON:0000965,2.61e-08,4;UBERON:0001803,2.61e-08,4;UBERON:0003073,2.61e-08,4;UBERON:0005426,2.61e-08,4;UBERON:0004535,8.44e-07,109 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,1.55210578223795,3.07421749925941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.899362287916574,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2297175461176,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,1.55210578223795,3.07421749925941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.899362287916574,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.491245205065606,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0,0,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2297175461176,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655678681511872,0,0.490296643507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p19@RPRD1B | |short_description=p19@RPRD1B | ||
}} | }} |
Latest revision as of 02:44, 16 September 2015
Short description: | p19@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_RPRD1B_5end |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | -274bp_to_ENST00000484683_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.49e-38 | 3 |
ciliated epithelial cell | 1.49e-38 | 3 |
multi-ciliated epithelial cell | 1.49e-38 | 3 |
non-pigmented ciliary epithelial cell | 1.49e-38 | 3 |
cortical cell of adrenal gland | 1.15e-15 | 2 |
steroid hormone secreting cell | 6.73e-11 | 3 |
columnar/cuboidal epithelial cell | 3.93e-10 | 27 |
crystallin accumulating cell | 2.61e-08 | 4 |
vertebrate lens cell | 2.61e-08 | 4 |
lens epithelial cell | 2.61e-08 | 4 |