FFCP PHASE1:Hg19::chr20:36694571..36694615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58490 | |EntrezGene=58490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=16209 | |HGNC=16209 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=100bp_to_uc002xhp.3_5end | |association_with_transcript=100bp_to_uc002xhp.3_5end | ||
|cluster_id=chr20:36694571..36694615,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_15_at_RPRD1B_5end | |description=CAGE_peak_15_at_RPRD1B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-14;12!CL:0000771;2.85e-10;2!CL:0000094;6.63e-10;8!CL:0000081;1.90e-07;11!CL:0000775;2.88e-07;3 | |ontology_enrichment_celltype_v019=CL:0000182;2.88e-14;12!CL:0000771;2.85e-10;2!CL:0000094;6.63e-10;8!CL:0000081;1.90e-07;11!CL:0000775;2.88e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-14,12;CL:0000771,2.72e-10,2;CL:0000094,5.80e-10,8;CL:0000081,1.73e-07,11;CL:0000775,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.56e-19;1 | |ontology_enrichment_development_v019=UBERON:0001045;1.56e-19;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:154;2.85e-10;2!DOID:4236;2.85e-10;2 | |ontology_enrichment_disease_v019=DOID:154;2.85e-10;2!DOID:4236;2.85e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:154,2.99e-10,2;DOID:4236,2.99e-10,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.56e-19;1!UBERON:0001154;1.56e-19;1!UBERON:0001153;1.56e-19;1!UBERON:0009854;1.56e-19;1!UBERON:0001961;1.56e-19;1!UBERON:0001744;1.56e-19;1!UBERON:0001042;1.56e-19;1!UBERON:0001735;1.56e-19;1!UBERON:0002107;1.08e-15;19!UBERON:0006925;1.08e-15;19!UBERON:0002423;5.15e-12;25!UBERON:0006562;1.89e-10;2!UBERON:0002365;4.57e-10;31!UBERON:0002330;4.57e-10;31!UBERON:0002368;3.52e-08;33!UBERON:0001007;2.05e-07;81!UBERON:0000949;6.21e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002372;1.56e-19;1!UBERON:0001154;1.56e-19;1!UBERON:0001153;1.56e-19;1!UBERON:0009854;1.56e-19;1!UBERON:0001961;1.56e-19;1!UBERON:0001744;1.56e-19;1!UBERON:0001042;1.56e-19;1!UBERON:0001735;1.56e-19;1!UBERON:0002107;1.08e-15;19!UBERON:0006925;1.08e-15;19!UBERON:0002423;5.15e-12;25!UBERON:0006562;1.89e-10;2!UBERON:0002365;4.57e-10;31!UBERON:0002330;4.57e-10;31!UBERON:0002368;3.52e-08;33!UBERON:0001007;2.05e-07;81!UBERON:0000949;6.21e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,7.63e-20,23;UBERON:0002372,1.56e-19,1;UBERON:0001961,1.56e-19,1;UBERON:0001744,1.56e-19,1;UBERON:0001735,1.56e-19,1;UBERON:0001154,1.88e-19,1;UBERON:0001153,1.88e-19,1;UBERON:0001045,1.88e-19,1;UBERON:0009856,1.42e-17,26;UBERON:0002107,1.11e-15,19;UBERON:0006925,1.11e-15,19;UBERON:0008836,1.11e-15,19;UBERON:0008835,1.35e-13,22;UBERON:0003894,1.35e-13,22;UBERON:0007499,5.23e-12,25;UBERON:0009497,5.23e-12,25;UBERON:0000015,5.23e-12,25;UBERON:0002423,5.23e-12,25;UBERON:0006235,5.23e-12,25;UBERON:0004161,5.23e-12,25;UBERON:0002365,9.55e-10,31;UBERON:0002330,9.55e-10,31;UBERON:0002368,1.15e-08,35;UBERON:0000949,8.51e-07,45 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0.450530678524519,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,5.89696330006576,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0.637938751653163,1.49801404789436,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0.276242966807689,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0.142283686696828,0,0.399158742865633,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0,0,2.21027132424918,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0.599428828746391,0.144090417154106,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,5.56898487976713,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,1.31043939538565,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0.9555033757741,0,0,0,0.347716544605159,0.801711364730253,0,0.17071847709395,0,0,0,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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0.211255286311942,0,0.209658645508376,0.22465726229299,0.450530678524519,0.32145117339416,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0.25618263945135,0.260118695119756,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,5.89696330006576,1.18157981336281,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.77005821767849,0,0,0,0,0.637938751653163,1.49801404789436,0,0,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0.241718899183244,0,0.276242966807689,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0.142283686696828,0,0.399158742865633,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0.284136146806413,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0,0,2.21027132424918,0.251932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0,0.10893846351899,0,0,0,0.23056390438806,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,1.02193298195737,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.174118413160805,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0.0882561266915003,0,0,0,0,0,0,0,0.599428828746391,0.144090417154106,0,0.171594997861965,0,0,0,0.135904206073614,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0.082092520749339,0,0,5.56898487976713,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0,0,0,0.235265819698172,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,1.31043939538565,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.147856086217045,0,0.781078098613847,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0.131545547125698,0.118193840883968,0,0.156986185701028,0.157115589916002,0,0,0,0.9555033757741,0,0,0,0.347716544605159,0.801711364730253,0,0.17071847709395,0,0,0,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| ||
|short_description=p15@RPRD1B | |short_description=p15@RPRD1B | ||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p15@RPRD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RPRD1B_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 100bp_to_uc002xhp.3_5end |
EntrezGene: | RPRD1B |
HGNC: | 16209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-14 | 12 |
eosinophil | 2.72e-10 | 2 |
granulocyte | 5.80e-10 | 8 |
blood cell | 1.73e-07 | 11 |
neutrophil | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 7.63e-20 | 23 |
tonsil | 1.56e-19 | 1 |
mucosa-associated lymphoid tissue | 1.56e-19 | 1 |
lymphoid tissue | 1.56e-19 | 1 |
tonsillar ring | 1.56e-19 | 1 |
vermiform appendix | 1.88e-19 | 1 |
caecum | 1.88e-19 | 1 |
midgut | 1.88e-19 | 1 |
sac | 1.42e-17 | 26 |
liver | 1.11e-15 | 19 |
digestive gland | 1.11e-15 | 19 |
liver bud | 1.11e-15 | 19 |
hepatic diverticulum | 1.35e-13 | 22 |
liver primordium | 1.35e-13 | 22 |
epithelial sac | 5.23e-12 | 25 |
epithelium of foregut-midgut junction | 5.23e-12 | 25 |
anatomical boundary | 5.23e-12 | 25 |
hepatobiliary system | 5.23e-12 | 25 |
foregut-midgut junction | 5.23e-12 | 25 |
septum transversum | 5.23e-12 | 25 |
exocrine gland | 9.55e-10 | 31 |
exocrine system | 9.55e-10 | 31 |
endocrine gland | 1.15e-08 | 35 |
endocrine system | 8.51e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 2.99e-10 | 2 |
carcinosarcoma | 2.99e-10 | 2 |