FFCP PHASE1:Hg19::chr8:126011002..126011010,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6713 | |EntrezGene=6713 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11279 | |HGNC=11279 | ||
|TSSclassifier=strong | |||
|UniProt=Q14534 | |UniProt=Q14534 | ||
|association_with_transcript=254bp_to_ENST00000265896_5end | |association_with_transcript=254bp_to_ENST00000265896_5end | ||
|cluster_id=chr8:126011002..126011010,+ | |||
|coexpression_cluster_id=C2881 | |coexpression_cluster_id=C2881 | ||
|description=CAGE_peak_6_at_SQLE_5end | |description=CAGE_peak_6_at_SQLE_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000988!3.93e-09!182;CL:0002032!6.35e-08!165;CL:0000837!6.35e-08!165;CL:0000037!7.61e-08!172;CL:0000566!7.61e-08!172;CL:0000453!1.97e-07!5;CL:0000034!2.97e-07!444;CL:0000723!3.26e-07!436;CL:0000048!4.03e-07!430 | |ontology_enrichment_celltype=CL:0000988!3.93e-09!182;CL:0002032!6.35e-08!165;CL:0000837!6.35e-08!165;CL:0000037!7.61e-08!172;CL:0000566!7.61e-08!172;CL:0000453!1.97e-07!5;CL:0000034!2.97e-07!444;CL:0000723!3.26e-07!436;CL:0000048!4.03e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000453;7.58e-36;5!CL:0000990;7.15e-20;8!CL:0000451;3.13e-16;10!CL:0001014;1.38e-15;2!CL:0001016;1.38e-15;2!CL:0002600;1.19e-14;2!CL:0000062;2.00e-07;9 | |ontology_enrichment_celltype_v019=CL:0000453;7.58e-36;5!CL:0000990;7.15e-20;8!CL:0000451;3.13e-16;10!CL:0001014;1.38e-15;2!CL:0001016;1.38e-15;2!CL:0002600;1.19e-14;2!CL:0000062;2.00e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,7.60e-36,5;CL:0000990,7.16e-20,8;CL:0000451,3.14e-16,10;CL:0001014,1.33e-15,2;CL:0001016,1.33e-15,2;CL:0002600,1.37e-14,2;CL:0000988,3.55e-09,177;CL:0000763,2.77e-08,108;CL:0000049,2.77e-08,108 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.69e-08;1!DOID:0060061;1.69e-08;1!DOID:8691;1.69e-08;1!DOID:9119;5.06e-08;1!DOID:8552;5.06e-08;1!DOID:8692;3.73e-07;31 | |ontology_enrichment_disease_v019=DOID:0060060;1.69e-08;1!DOID:0060061;1.69e-08;1!DOID:8691;1.69e-08;1!DOID:9119;5.06e-08;1!DOID:8552;5.06e-08;1!DOID:8692;3.73e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.75e-08,1;DOID:0060061,1.75e-08,1;DOID:8691,1.75e-08,1;DOID:8552,4.41e-08,1;DOID:9119,4.72e-08,1;DOID:1240,1.02e-07,39;DOID:2531,1.87e-07,51;DOID:0060083,1.87e-07,51;DOID:8692,2.26e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.05e-09;7!UBERON:0001005;2.05e-09;7!UBERON:0002331;4.46e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0003126;2.05e-09;7!UBERON:0001005;2.05e-09;7!UBERON:0002331;4.46e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.44e-09,7;UBERON:0001005,2.44e-09,7;UBERON:0002331,4.46e-07,10;UBERON:0000358,4.46e-07,10;UBERON:0000307,4.46e-07,10;UBERON:0000091,4.46e-07,10;UBERON:0000087,4.46e-07,10;UBERON:0007010,4.46e-07,10;UBERON:0007806,4.46e-07,10;UBERON:0008780,4.46e-07,10;UBERON:0005728,4.46e-07,10 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.865818594450472,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.637812899895131,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,0,0,0.393419540227666,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0,1.24484414159907,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0,0.57978255948989,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,4.41026134156626,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0,0,0,0.246217006087397,1.17002132569619,0.743155811443641,0,0,0.141775097242386,0,0.290633938513962,0,2.95597942737566,0.264145302039678,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.534192213880424,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,2.62357900818653,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,2.01090682660736,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0,1.59663497146253,0,1.05836791361941,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,2.43410110628385,1.33228787199128,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0.31396051279005,1.49590513710141,0.902382642468723,0.588187602953219,1.67821586975843,0.37950746544837,0,0,0,0,0,0,0,0,5.93042257361244,7.04314451995066,7.20511451587642,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0,0.482259445395058,0,0,14.1733551677445,4.6428117273477,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.328370082997356,0,0.226624183040251,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,1.52322084867518,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,2.33832370607266,8.6362146203686,3.92556946214026,0,0,0,3.59977312538874,0.106691729694141,0,0.567515953566836,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,2.78482710962785,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.328402357799783,0.865818594450472,0,0.383829398097213,0,0,0,0,0,0.284338464974843,0,0.553995408531877,0.401088894940283,0.868043482863407,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.637812899895131,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,2.64342657158052,0,0,0.393419540227666,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0.766440987203842,0,0,0,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0,0,0,1.24484414159907,0,0,0,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0.10075209822764,0,0.57978255948989,0,0.286804595389004,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,4.41026134156626,0,0,0,0,0,0,0.109750285408626,0,0,0.185176890317059,0,0,0,0.231860809950154,0.234817388471643,0.288732895522148,0,0,0,0,0.246217006087397,1.17002132569619,0.743155811443641,0,0,0.141775097242386,0,0.290633938513962,0,2.95597942737566,0.264145302039678,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.799783929456456,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0.184369168541703,0.0868836144680828,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.170453254832202,0.534192213880424,0,0,0.127612712494584,0,0,0,0,0,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,1.15755106853338,2.62357900818653,0.202910376962704,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,2.01090682660736,0,0,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.284567373393656,0,1.59663497146253,0,1.05836791361941,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0.166849141711909,0,0.556812347790485,0,2.43410110628385,1.33228787199128,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.369254416383208,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0.31396051279005,1.49590513710141,0.902382642468723,0.588187602953219,1.67821586975843,0.37950746544837,0,0,0,0,0,0,0,0,5.93042257361244,7.04314451995066,7.20511451587642,0.067401132980677,0,0,0,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0.19351266257817,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0,0,0.0846733320657845,0,0,0.482259445395058,0,0,14.1733551677445,4.6428117273477,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.328370082997356,0,0.226624183040251,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0,0,0,0,1.52322084867518,0,0,0.322231671127465,0,0,0,0,0,0,0.192619830407303,1.28664954824955,0,0,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,2.33832370607266,8.6362146203686,3.92556946214026,0,0,0,3.59977312538874,0.106691729694141,0,0.567515953566836,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,2.78482710962785,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.193766729508018,0.124149428591716,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p6@SQLE | |short_description=p6@SQLE | ||
}} | }} |
Latest revision as of 02:38, 16 September 2015
Short description: | p6@SQLE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SQLE_5end |
Coexpression cluster: | C2881_immature_migratory_cord_Mast_mycosis_Smooth_acute |
Association with transcript: | 254bp_to_ENST00000265896_5end |
EntrezGene: | SQLE |
HGNC: | 11279 |
UniProt: | Q14534 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.60e-36 | 5 |
conventional dendritic cell | 7.16e-20 | 8 |
dendritic cell | 3.14e-16 | 10 |
CD1a-positive Langerhans cell | 1.33e-15 | 2 |
immature CD1a-positive Langerhans cell | 1.33e-15 | 2 |
smooth muscle cell of trachea | 1.37e-14 | 2 |
hematopoietic cell | 3.55e-09 | 177 |
myeloid cell | 2.77e-08 | 108 |
common myeloid progenitor | 2.77e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
trachea | 2.44e-09 | 7 |
respiratory airway | 2.44e-09 | 7 |
umbilical cord | 4.46e-07 | 10 |
blastocyst | 4.46e-07 | 10 |
blastula | 4.46e-07 | 10 |
bilaminar disc | 4.46e-07 | 10 |
inner cell mass | 4.46e-07 | 10 |
cleaving embryo | 4.46e-07 | 10 |
connecting stalk | 4.46e-07 | 10 |
inner cell mass derived epiblast | 4.46e-07 | 10 |
extraembryonic mesoderm | 4.46e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.75e-08 | 1 |
cutaneous T cell lymphoma | 1.75e-08 | 1 |
mycosis fungoides | 1.75e-08 | 1 |
chronic myeloid leukemia | 4.41e-08 | 1 |
acute myeloid leukemia | 4.72e-08 | 1 |
leukemia | 1.02e-07 | 39 |
hematologic cancer | 1.87e-07 | 51 |
immune system cancer | 1.87e-07 | 51 |
myeloid leukemia | 2.26e-07 | 31 |