FFCP PHASE1:Hg19::chr1:111682813..111682831,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128338 | |EntrezGene=128338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28769 | |HGNC=28769 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484310_5end | |association_with_transcript=0bp_to_ENST00000484310_5end | ||
|cluster_id=chr1:111682813..111682831,- | |||
|description=CAGE_peak_4_at_DRAM2_5end | |description=CAGE_peak_4_at_DRAM2_5end | ||
|id=chr1:111682813..111682831,- | |id=chr1:111682813..111682831,- | ||
|ontology_enrichment_celltype=CL:0000738!2.28e-11!140;CL:0000791!4.91e-11!18;CL:0000789!4.91e-11!18;CL:0002420!4.91e-11!18;CL:0002419!4.91e-11!18;CL:0000790!4.91e-11!18;CL:0002031!6.81e-10!124;CL:0000037!9.05e-10!172;CL:0000566!9.05e-10!172;CL:0002087!3.49e-09!119;CL:0000838!4.98e-09!52;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0002032!1.80e-08!165;CL:0000837!1.80e-08!165;CL:0000625!9.36e-08!11;CL:0000084!9.81e-08!25;CL:0000827!9.81e-08!25;CL:0000988!3.59e-07!182 | |ontology_enrichment_celltype=CL:0000738!2.28e-11!140;CL:0000791!4.91e-11!18;CL:0000789!4.91e-11!18;CL:0002420!4.91e-11!18;CL:0002419!4.91e-11!18;CL:0000790!4.91e-11!18;CL:0002031!6.81e-10!124;CL:0000037!9.05e-10!172;CL:0000566!9.05e-10!172;CL:0002087!3.49e-09!119;CL:0000838!4.98e-09!52;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0002032!1.80e-08!165;CL:0000837!1.80e-08!165;CL:0000625!9.36e-08!11;CL:0000084!9.81e-08!25;CL:0000827!9.81e-08!25;CL:0000988!3.59e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.08e-12;18!CL:0000789;4.08e-12;18!CL:0002419;4.08e-12;18!CL:0000084;1.99e-08;25!CL:0000625;2.72e-08;11!CL:0000236;7.30e-07;13 | |ontology_enrichment_celltype_v019=CL:0000791;4.08e-12;18!CL:0000789;4.08e-12;18!CL:0002419;4.08e-12;18!CL:0000084;1.99e-08;25!CL:0000625;2.72e-08;11!CL:0000236;7.30e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.73e-11,18;CL:0000789,1.73e-11,18;CL:0002420,1.73e-11,18;CL:0002419,1.73e-11,18;CL:0000790,1.73e-11,18;CL:0000738,2.32e-10,136;CL:0002031,7.81e-09,120;CL:0000037,1.53e-08,168;CL:0000838,2.24e-08,52;CL:0002087,3.99e-08,115;CL:0000625,4.72e-08,11;CL:0000084,5.46e-08,25;CL:0000827,5.46e-08,25;CL:0000542,7.15e-08,53;CL:0000051,7.15e-08,53;CL:0002032,2.21e-07,161;CL:0000837,2.21e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.08e-12;18 | |ontology_enrichment_development_v019=CL:0000790;4.08e-12;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.31e-12!115 | |ontology_enrichment_uberon=UBERON:0007023!5.31e-12!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-12,114 | |||
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| ||
|short_description=p4@DRAM2 | |short_description=p4@DRAM2 | ||
}} | }} |
Latest revision as of 02:37, 16 September 2015
Short description: | p4@DRAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_DRAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000484310_5end |
EntrezGene: | DRAM2 |
HGNC: | 28769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.73e-11 | 18 |
alpha-beta T cell | 1.73e-11 | 18 |
immature T cell | 1.73e-11 | 18 |
mature T cell | 1.73e-11 | 18 |
immature alpha-beta T cell | 1.73e-11 | 18 |
leukocyte | 2.32e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 7.81e-09 | 120 |
hematopoietic stem cell | 1.53e-08 | 168 |
lymphoid lineage restricted progenitor cell | 2.24e-08 | 52 |
nongranular leukocyte | 3.99e-08 | 115 |
CD8-positive, alpha-beta T cell | 4.72e-08 | 11 |
T cell | 5.46e-08 | 25 |
pro-T cell | 5.46e-08 | 25 |
lymphocyte | 7.15e-08 | 53 |
common lymphoid progenitor | 7.15e-08 | 53 |
hematopoietic oligopotent progenitor cell | 2.21e-07 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.43e-12 | 114 |