FFCP PHASE1:Hg19::chr7:12727250..12727265,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10124 | |EntrezGene=10124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=695 | |HGNC=695 | ||
|TSSclassifier=strong | |||
|UniProt=P40617 | |UniProt=P40617 | ||
|association_with_transcript=0bp_to_ENST00000404894_5end | |association_with_transcript=0bp_to_ENST00000404894_5end | ||
|cluster_id=chr7:12727250..12727265,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_1_at_ARL4A_5end | |description=CAGE_peak_1_at_ARL4A_5end | ||
|id=chr7:12727250..12727265,+ | |id=chr7:12727250..12727265,+ | ||
|ontology_enrichment_celltype=CL:0002057!5.96e-14!42;CL:0000860!1.20e-13!45;CL:0000839!7.47e-08!70;CL:0000557!8.82e-07!71 | |ontology_enrichment_celltype=CL:0002057!5.96e-14!42;CL:0000860!1.20e-13!45;CL:0000839!7.47e-08!70;CL:0000557!8.82e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.83e-10;33!CL:0002057;2.83e-10;33!CL:0000576;7.34e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.86e-14,42;CL:0002057,5.86e-14,42;CL:0000473,9.98e-10,48;CL:0000234,9.98e-10,48;CL:0000839,1.34e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;2.35e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-14!115;UBERON:0000468!7.61e-14!659;UBERON:0000467!4.80e-10!625;UBERON:0000480!7.91e-10!626;UBERON:0000062!2.64e-09!511;UBERON:0000922!6.26e-08!612;UBERON:0002193!1.66e-07!112;UBERON:0002050!5.52e-07!605;UBERON:0005423!5.52e-07!605;UBERON:0000923!9.33e-07!604;UBERON:0005291!9.33e-07!604;UBERON:0006598!9.33e-07!604;UBERON:0002532!9.33e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.29e-13,114;UBERON:0002050,8.29e-09,564;UBERON:0000923,2.46e-08,560;UBERON:0010316,2.46e-08,560;UBERON:0005291,2.46e-08,560;UBERON:0006598,2.46e-08,560;UBERON:0010317,2.46e-08,560;UBERON:0002532,2.46e-08,560;UBERON:0000922,4.12e-08,592;UBERON:0002193,3.15e-07,108;UBERON:0005423,4.67e-07,581;UBERON:0011216,9.23e-07,223 | |||
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| ||
|short_description=p1@ARL4A | |short_description=p1@ARL4A | ||
}} | }} |
Latest revision as of 02:36, 16 September 2015
Short description: | p1@ARL4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARL4A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000404894_5end |
EntrezGene: | ARL4A |
HGNC: | 695 |
UniProt: | P40617 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.86e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.86e-14 | 42 |
defensive cell | 9.98e-10 | 48 |
phagocyte | 9.98e-10 | 48 |
myeloid lineage restricted progenitor cell | 1.34e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.29e-13 | 114 |
embryonic structure | 8.29e-09 | 564 |
germ layer | 2.46e-08 | 560 |
germ layer / neural crest | 2.46e-08 | 560 |
embryonic tissue | 2.46e-08 | 560 |
presumptive structure | 2.46e-08 | 560 |
germ layer / neural crest derived structure | 2.46e-08 | 560 |
epiblast (generic) | 2.46e-08 | 560 |
embryo | 4.12e-08 | 592 |
hemolymphoid system | 3.15e-07 | 108 |
developing anatomical structure | 4.67e-07 | 581 |
organ system subdivision | 9.23e-07 | 223 |