FFCP PHASE1:Hg19::chr16:2933187..2933196,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114984 | |EntrezGene=114984 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25178 | |HGNC=25178 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CP2 | |UniProt=Q96CP2 | ||
|association_with_transcript=0bp_to_ENST00000396958,NM_001142499,NM_001142500,NM_138439,uc002csa.2,uc010uwj.1,uc010uwk.1_5end | |association_with_transcript=0bp_to_ENST00000396958,NM_001142499,NM_001142500,NM_138439,uc002csa.2,uc010uwj.1,uc010uwk.1_5end | ||
|cluster_id=chr16:2933187..2933196,+ | |||
|description=CAGE_peak_4_at_FLYWCH2_5end | |description=CAGE_peak_4_at_FLYWCH2_5end | ||
|id=chr16:2933187..2933196,+ | |id=chr16:2933187..2933196,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.64e-13!180;CL:0000183!4.19e-09!59;CL:0000680!1.15e-07!57;CL:0000056!1.15e-07!57;CL:0000355!1.15e-07!57;CL:0000187!1.58e-07!54;CL:0000393!4.74e-07!60;CL:0000211!4.74e-07!60;CL:0000192!8.52e-07!42;CL:0000514!8.52e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.64e-13!180;CL:0000183!4.19e-09!59;CL:0000680!1.15e-07!57;CL:0000056!1.15e-07!57;CL:0000355!1.15e-07!57;CL:0000187!1.58e-07!54;CL:0000393!4.74e-07!60;CL:0000211!4.74e-07!60;CL:0000192!8.52e-07!42;CL:0000514!8.52e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.59e-07,58;CL:0000056,1.59e-07,58;CL:0000355,1.59e-07,58;CL:0000187,1.78e-07,55;CL:0000393,2.50e-07,61;CL:0000211,2.50e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.31e-15!347;UBERON:0000475!4.05e-15!365;UBERON:0000477!5.82e-12!286;UBERON:0000119!1.70e-09!312;UBERON:0000483!2.09e-09!309;UBERON:0003075!2.13e-09!86;UBERON:0007284!2.13e-09!86;UBERON:0002346!3.42e-09!90;UBERON:0000064!3.17e-08!219;UBERON:0003104!1.62e-07!238;UBERON:0009142!1.62e-07!238;UBERON:0001134!1.83e-07!61;UBERON:0002036!1.83e-07!61;UBERON:0003082!1.83e-07!61;UBERON:0002385!2.24e-07!63;UBERON:0001015!2.24e-07!63;UBERON:0000383!2.24e-07!63;UBERON:0000468!3.68e-07!659;UBERON:0000025!7.76e-07!194;UBERON:0004111!8.59e-07!241;UBERON:0002100!9.04e-07!216;UBERON:0000914!9.54e-07!83;UBERON:0002329!9.54e-07!83;UBERON:0003077!9.54e-07!83;UBERON:0003059!9.54e-07!83;UBERON:0007282!9.54e-07!83;UBERON:0009618!9.54e-07!83;UBERON:0007285!9.54e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.88e-09,132;UBERON:0000119,3.91e-09,309;UBERON:0000483,4.87e-09,306;UBERON:0007503,1.46e-08,78;UBERON:0003075,4.02e-08,82;UBERON:0007284,4.02e-08,82;UBERON:0002346,8.27e-08,86;UBERON:0001134,1.51e-07,62;UBERON:0002036,1.51e-07,62;UBERON:0003082,1.51e-07,62;UBERON:0002385,1.83e-07,64;UBERON:0001015,1.83e-07,64;UBERON:0000383,1.83e-07,64;UBERON:0000923,6.83e-07,560;UBERON:0010316,6.83e-07,560;UBERON:0005291,6.83e-07,560;UBERON:0006598,6.83e-07,560;UBERON:0010317,6.83e-07,560;UBERON:0002532,6.83e-07,560;UBERON:0000025,8.76e-07,192;UBERON:0007524,9.17e-07,73;UBERON:0002329,9.40e-07,71;UBERON:0003059,9.40e-07,71;UBERON:0007282,9.40e-07,71;UBERON:0004290,9.40e-07,71;UBERON:0009618,9.40e-07,71;UBERON:0003077,9.67e-07,72;UBERON:0007285,9.67e-07,72 | |||
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| ||
|short_description=p4@FLYWCH2 | |short_description=p4@FLYWCH2 | ||
}} | }} |
Latest revision as of 02:34, 16 September 2015
Short description: | p4@FLYWCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FLYWCH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396958, NM_001142499, NM_001142500, NM_138439, uc002csa.2, uc010uwj.1, uc010uwk.1_5end |
EntrezGene: | FLYWCH2 |
HGNC: | 25178 |
UniProt: | Q96CP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.59e-07 | 58 |
myoblast | 1.59e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.59e-07 | 58 |
muscle cell | 1.78e-07 | 55 |
electrically responsive cell | 2.50e-07 | 61 |
electrically active cell | 2.50e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.88e-09 | 132 |
cell layer | 3.91e-09 | 309 |
epithelium | 4.87e-09 | 306 |
epithelial vesicle | 1.46e-08 | 78 |
neural plate | 4.02e-08 | 82 |
presumptive neural plate | 4.02e-08 | 82 |
neurectoderm | 8.27e-08 | 86 |
skeletal muscle tissue | 1.51e-07 | 62 |
striated muscle tissue | 1.51e-07 | 62 |
myotome | 1.51e-07 | 62 |
muscle tissue | 1.83e-07 | 64 |
musculature | 1.83e-07 | 64 |
musculature of body | 1.83e-07 | 64 |
germ layer | 6.83e-07 | 560 |
germ layer / neural crest | 6.83e-07 | 560 |
embryonic tissue | 6.83e-07 | 560 |
presumptive structure | 6.83e-07 | 560 |
germ layer / neural crest derived structure | 6.83e-07 | 560 |
epiblast (generic) | 6.83e-07 | 560 |
tube | 8.76e-07 | 192 |
dense mesenchyme tissue | 9.17e-07 | 73 |
somite | 9.40e-07 | 71 |
presomitic mesoderm | 9.40e-07 | 71 |
presumptive segmental plate | 9.40e-07 | 71 |
dermomyotome | 9.40e-07 | 71 |
trunk paraxial mesoderm | 9.40e-07 | 71 |
paraxial mesoderm | 9.67e-07 | 72 |
presumptive paraxial mesoderm | 9.67e-07 | 72 |