FFCP PHASE1:Hg19::chr7:12726474..12726542,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10124 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=695 | |||
|TSSclassifier=strong | |||
|UniProt=P40617 | |||
|association_with_transcript=0bp_to_ENST00000356797,ENST00000396662,ENST00000396664,uc003ssp.2,uc003ssq.2,uc003ssr.2_5end | |||
|cluster_id=chr7:12726474..12726542,+ | |||
|description=CAGE_peak_2_at_ARL4A_5end | |||
|id=chr7:12726474..12726542,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.76e-24!172;CL:0000566!2.76e-24!172;CL:0000738!4.60e-23!140;CL:0002032!4.74e-22!165;CL:0000837!4.74e-22!165;CL:0000988!4.76e-22!182;CL:0002031!3.73e-21!124;CL:0002087!1.25e-18!119;CL:0000860!2.89e-18!45;CL:0002057!1.08e-17!42;CL:0000557!6.67e-17!71;CL:0000763!7.45e-17!112;CL:0000049!7.45e-17!112;CL:0000839!1.65e-16!70;CL:0000766!1.90e-15!76;CL:0002009!4.82e-14!65;CL:0002194!3.67e-13!63;CL:0000576!3.67e-13!63;CL:0000040!3.67e-13!63;CL:0000559!3.67e-13!63;CL:0002393!2.63e-07!9;CL:0002397!2.63e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-11;33!CL:0002057;2.22e-11;33!CL:0000576;3.88e-10;48!CL:0000473;5.41e-09;39!CL:0000234;5.41e-09;39!CL:0000766;1.10e-08;69!CL:0002087;8.03e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.59e-24,168;CL:0000738,1.49e-22,136;CL:0000988,5.37e-22,177;CL:0002032,1.43e-21,161;CL:0000837,1.43e-21,161;CL:0002031,1.32e-20,120;CL:0002087,4.31e-18,115;CL:0000860,1.07e-17,42;CL:0002057,1.07e-17,42;CL:0000473,2.43e-16,48;CL:0000234,2.43e-16,48;CL:0000763,2.86e-16,108;CL:0000049,2.86e-16,108;CL:0000557,2.97e-16,67;CL:0000839,7.31e-16,66;CL:0000766,7.56e-15,72;CL:0002009,2.13e-13,61;CL:0002194,1.61e-12,59;CL:0000576,1.61e-12,59;CL:0000040,1.61e-12,59;CL:0000559,1.61e-12,59;CL:0002393,2.62e-07,9;CL:0002397,2.62e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.54e-19!102;UBERON:0003061!6.54e-19!102;UBERON:0002193!1.77e-15!112;UBERON:0002371!4.97e-14!80;UBERON:0001474!4.84e-13!86;UBERON:0004765!2.21e-10!101;UBERON:0001434!2.21e-10!101;UBERON:0002405!2.92e-09!115;UBERON:0000178!1.37e-07!15;UBERON:0000179!1.37e-07!15;UBERON:0000463!1.37e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.35e-07;15!UBERON:0000179;1.35e-07;15!UBERON:0000463;1.35e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.86e-18,98;UBERON:0003061,3.86e-18,98;UBERON:0002193,8.74e-15,108;UBERON:0002371,2.45e-13,76;UBERON:0001474,2.22e-12,82;UBERON:0002405,8.45e-10,93;UBERON:0004765,1.02e-09,90;UBERON:0001434,1.47e-08,100;UBERON:0000178,1.36e-07,15;UBERON:0000179,1.36e-07,15;UBERON:0000463,1.36e-07,15 | |||
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| |||
|short_description=p2@ARL4A | |||
}} |
Latest revision as of 02:33, 16 September 2015
Short description: | p2@ARL4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARL4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356797, ENST00000396662, ENST00000396664, uc003ssp.2, uc003ssq.2, uc003ssr.2_5end |
EntrezGene: | ARL4A |
HGNC: | 695 |
UniProt: | P40617 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.59e-24 | 168 |
leukocyte | 1.49e-22 | 136 |
hematopoietic cell | 5.37e-22 | 177 |
hematopoietic oligopotent progenitor cell | 1.43e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.43e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.32e-20 | 120 |
nongranular leukocyte | 4.31e-18 | 115 |
classical monocyte | 1.07e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-17 | 42 |
defensive cell | 2.43e-16 | 48 |
phagocyte | 2.43e-16 | 48 |
myeloid cell | 2.86e-16 | 108 |
common myeloid progenitor | 2.86e-16 | 108 |
granulocyte monocyte progenitor cell | 2.97e-16 | 67 |
myeloid lineage restricted progenitor cell | 7.31e-16 | 66 |
myeloid leukocyte | 7.56e-15 | 72 |
macrophage dendritic cell progenitor | 2.13e-13 | 61 |
monopoietic cell | 1.61e-12 | 59 |
monocyte | 1.61e-12 | 59 |
monoblast | 1.61e-12 | 59 |
promonocyte | 1.61e-12 | 59 |
intermediate monocyte | 2.62e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.62e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.86e-18 | 98 |
blood island | 3.86e-18 | 98 |
hemolymphoid system | 8.74e-15 | 108 |
bone marrow | 2.45e-13 | 76 |
bone element | 2.22e-12 | 82 |
immune system | 8.45e-10 | 93 |
skeletal element | 1.02e-09 | 90 |
skeletal system | 1.47e-08 | 100 |
blood | 1.36e-07 | 15 |
haemolymphatic fluid | 1.36e-07 | 15 |
organism substance | 1.36e-07 | 15 |