FFCP PHASE1:Hg19::chr1:227327399..227327429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8476 | |EntrezGene=8476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1737 | |HGNC=1737 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYF6 | |UniProt=Q9NYF6 | ||
|association_with_transcript=-67bp_to_AF250871_5end | |association_with_transcript=-67bp_to_AF250871_5end | ||
|cluster_id=chr1:227327399..227327429,- | |||
|description=CAGE_peak_6_at_CDC42BPA_5end | |description=CAGE_peak_6_at_CDC42BPA_5end | ||
|id=chr1:227327399..227327429,- | |id=chr1:227327399..227327429,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!5.47e-10!143;DOID:14566!2.31e-09!239;DOID:162!5.04e-09!235;DOID:305!4.19e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.31e-10!57;UBERON:0005068!5.31e-10!57;UBERON:0006241!5.31e-10!57;UBERON:0007135!5.31e-10!57;UBERON:0000955!2.38e-09!69;UBERON:0006238!2.38e-09!69;UBERON:0000073!3.33e-09!94;UBERON:0001016!3.33e-09!94;UBERON:0001017!5.80e-09!82;UBERON:0002616!1.15e-08!59;UBERON:0005743!1.73e-08!86;UBERON:0003080!2.39e-08!42;UBERON:0002780!3.31e-08!41;UBERON:0001890!3.31e-08!41;UBERON:0006240!3.31e-08!41;UBERON:0000468!1.81e-07!659;UBERON:0002346!3.43e-07!90;UBERON:0002020!5.02e-07!34;UBERON:0003528!5.02e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.52e-07;34!UBERON:0002020;2.52e-07;34!UBERON:0002791;9.38e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.23e-11,56;UBERON:0005068,5.23e-11,56;UBERON:0006241,5.23e-11,56;UBERON:0007135,5.23e-11,56;UBERON:0000073,3.16e-10,53;UBERON:0002616,3.16e-10,53;UBERON:0000955,2.95e-09,68;UBERON:0006238,2.95e-09,68;UBERON:0002346,7.08e-09,86;UBERON:0001016,9.59e-09,89;UBERON:0001017,9.72e-09,81;UBERON:0003528,1.28e-08,34;UBERON:0002020,1.28e-08,34;UBERON:0003075,2.42e-08,82;UBERON:0007284,2.42e-08,82;UBERON:0002780,3.05e-08,41;UBERON:0001890,3.05e-08,41;UBERON:0003080,3.05e-08,41;UBERON:0006240,3.05e-08,41;UBERON:0002791,9.16e-08,32;UBERON:0010371,2.35e-07,104;UBERON:0001893,5.06e-07,34;UBERON:0001869,9.82e-07,32 | |||
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| ||
|short_description=p6@CDC42BPA | |short_description=p6@CDC42BPA | ||
}} | }} |
Latest revision as of 02:23, 16 September 2015
Short description: | p6@CDC42BPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CDC42BPA_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_AF250871_5end |
EntrezGene: | CDC42BPA |
HGNC: | 1737 |
UniProt: | Q9NYF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 5.23e-11 | 56 |
neural rod | 5.23e-11 | 56 |
future spinal cord | 5.23e-11 | 56 |
neural keel | 5.23e-11 | 56 |
regional part of nervous system | 3.16e-10 | 53 |
regional part of brain | 3.16e-10 | 53 |
brain | 2.95e-09 | 68 |
future brain | 2.95e-09 | 68 |
neurectoderm | 7.08e-09 | 86 |
nervous system | 9.59e-09 | 89 |
central nervous system | 9.72e-09 | 81 |
brain grey matter | 1.28e-08 | 34 |
gray matter | 1.28e-08 | 34 |
neural plate | 2.42e-08 | 82 |
presumptive neural plate | 2.42e-08 | 82 |
regional part of forebrain | 3.05e-08 | 41 |
forebrain | 3.05e-08 | 41 |
anterior neural tube | 3.05e-08 | 41 |
future forebrain | 3.05e-08 | 41 |
regional part of telencephalon | 9.16e-08 | 32 |
ecto-epithelium | 2.35e-07 | 104 |
telencephalon | 5.06e-07 | 34 |
cerebral hemisphere | 9.82e-07 | 32 |