FFCP PHASE1:Hg19::chr2:237076992..237077008,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:237076992..237077008,-
|short_description=p2@GBX2
|description=CAGE_peak_2_at_GBX2_5end
|association_with_transcript=3bp_to_ENST00000306318_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2637 | |EntrezGene=2637 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4186 | |HGNC=4186 | ||
|TSSclassifier=strong | |||
|UniProt=P52951 | |UniProt=P52951 | ||
|association_with_transcript=3bp_to_ENST00000306318_5end | |||
|cluster_id=chr2:237076992..237077008,- | |||
|coexpression_cluster_id=C4202 | |||
|description=CAGE_peak_2_at_GBX2_5end | |||
|id=chr2:237076992..237077008,- | |||
|ontology_enrichment_celltype=CL:0000213!1.76e-15!57;CL:0000215!1.76e-15!57;CL:0000115!1.30e-14!35;CL:0002139!1.31e-13!24;CL:1000413!4.02e-13!9;CL:0002078!8.28e-13!44;CL:0000066!1.33e-12!254;CL:0000071!2.76e-11!18;CL:0002546!2.76e-11!18;CL:0002544!4.70e-09!6;CL:0000076!1.63e-08!62;CL:0002322!5.04e-08!5;CL:0000039!5.70e-08!7;CL:0000586!5.70e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:1000413;2.03e-26;9!CL:0002544;1.08e-15;6!CL:0000039;1.59e-14;7!CL:0000586;1.59e-14;7!CL:0002603;1.39e-13;3!CL:0000115;6.42e-13;36!CL:0002322;1.11e-12;5!CL:0000071;1.48e-12;18!CL:0002139;1.95e-11;24!CL:0002078;2.06e-09;45!CL:0000213;1.23e-08;58!CL:0000215;1.23e-08;58!CL:0002545;1.26e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,1.87e-26,9;CL:0002544,1.18e-15,6;CL:0000039,2.14e-14,7;CL:0000586,2.14e-14,7;CL:0002078,6.22e-14,45;CL:0000213,1.31e-13,58;CL:0000215,1.31e-13,58;CL:0002603,1.42e-13,3;CL:0000115,3.46e-13,36;CL:0002322,6.60e-13,5;CL:0000071,1.42e-12,18;CL:0002546,1.42e-12,18;CL:0002139,1.83e-11,24;CL:0000066,3.24e-09,253;CL:0002545,1.68e-08,2;CL:0000222,3.65e-07,121;CL:0002321,6.21e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;1.48e-12;18!UBERON:0009117;2.25e-10;10!UBERON:0005564;2.25e-10;10 | |||
|ontology_enrichment_disease=DOID:0050687!2.63e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!1.52e-13!15;UBERON:0003057!1.52e-13!15;UBERON:0003915!4.02e-13!9;UBERON:0004700!4.02e-13!9;UBERON:0001917!4.02e-13!9;UBERON:0004733!2.08e-12!12;UBERON:0002028!2.08e-12!12;UBERON:0007277!2.08e-12!12;UBERON:0001986!2.76e-11!18;UBERON:0004638!2.76e-11!18;UBERON:0004852!2.76e-11!18;UBERON:0004732!3.26e-11!13;UBERON:0000487!7.54e-10!22;UBERON:0006914!9.99e-10!25;UBERON:0002680!4.50e-09!9;UBERON:0001895!4.50e-09!9;UBERON:0010092!4.50e-09!9;UBERON:0001017!4.65e-08!82;UBERON:0001049!2.22e-07!57;UBERON:0005068!2.22e-07!57;UBERON:0006241!2.22e-07!57;UBERON:0007135!2.22e-07!57;UBERON:0005743!2.61e-07!86;UBERON:0000955!3.88e-07!69;UBERON:0006238!3.88e-07!69;UBERON:0002298!5.10e-07!8;UBERON:0000073!7.42e-07!94;UBERON:0001016!7.42e-07!94;UBERON:0002616!8.03e-07!59;UBERON:0000025!9.90e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;2.03e-26;9!UBERON:0004700;2.03e-26;9!UBERON:0001917;2.03e-26;9!UBERON:0004638;1.48e-12;18!UBERON:0001986;1.48e-12;18!UBERON:0004852;1.48e-12;18!UBERON:0004733;1.98e-11;12!UBERON:0002028;1.98e-11;12!UBERON:0002037;2.82e-11;6!UBERON:0006914;4.25e-11;25!UBERON:0002680;4.38e-11;9!UBERON:0001895;4.38e-11;9!UBERON:0004732;1.68e-10;13!UBERON:0000487;4.89e-10;22!UBERON:0005800;1.26e-08;2!UBERON:0001515;1.26e-08;2!UBERON:0000473;1.38e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.87e-26,9;UBERON:0004700,1.87e-26,9;UBERON:0001917,1.87e-26,9;UBERON:0004638,1.42e-12,18;UBERON:0001986,1.42e-12,18;UBERON:0004852,1.42e-12,18;UBERON:0003076,5.11e-12,15;UBERON:0003057,5.11e-12,15;UBERON:0004733,2.18e-11,12;UBERON:0002028,2.18e-11,12;UBERON:0007277,2.18e-11,12;UBERON:0002037,2.98e-11,6;UBERON:0006215,2.98e-11,6;UBERON:0006914,4.10e-11,25;UBERON:0002680,4.43e-11,9;UBERON:0001895,4.43e-11,9;UBERON:0010092,4.43e-11,9;UBERON:0004732,1.84e-10,13;UBERON:0000487,4.74e-10,22;UBERON:0000473,1.44e-08,8;UBERON:0005800,1.68e-08,2;UBERON:0001515,1.68e-08,2 | |||
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| ||
|short_description=p2@GBX2 | |||
}} | }} |
Latest revision as of 02:18, 16 September 2015
Short description: | p2@GBX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBX2_5end |
Coexpression cluster: | C4202_Hepatic_Astrocyte_testicular_teratocarcinoma_synovial_basal_prostate |
Association with transcript: | 3bp_to_ENST00000306318_5end |
EntrezGene: | GBX2 |
HGNC: | 4186 |
UniProt: | P52951 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 1.87e-26 | 9 |
aortic endothelial cell | 1.18e-15 | 6 |
germ line cell | 2.14e-14 | 7 |
germ cell | 2.14e-14 | 7 |
meso-epithelial cell | 6.22e-14 | 45 |
lining cell | 1.31e-13 | 58 |
barrier cell | 1.31e-13 | 58 |
astrocyte of the cerebellum | 1.42e-13 | 3 |
endothelial cell | 3.46e-13 | 36 |
embryonic stem cell | 6.60e-13 | 5 |
blood vessel endothelial cell | 1.42e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.42e-12 | 18 |
endothelial cell of vascular tree | 1.83e-11 | 24 |
epithelial cell | 3.24e-09 | 253 |
thoracic aorta endothelial cell | 1.68e-08 | 2 |
mesodermal cell | 3.65e-07 | 121 |
embryonic cell | 6.21e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.87e-26 | 9 |
arterial system endothelium | 1.87e-26 | 9 |
endothelium of artery | 1.87e-26 | 9 |
blood vessel endothelium | 1.42e-12 | 18 |
endothelium | 1.42e-12 | 18 |
cardiovascular system endothelium | 1.42e-12 | 18 |
posterior neural tube | 5.11e-12 | 15 |
chordal neural plate | 5.11e-12 | 15 |
segmental subdivision of hindbrain | 2.18e-11 | 12 |
hindbrain | 2.18e-11 | 12 |
presumptive hindbrain | 2.18e-11 | 12 |
cerebellum | 2.98e-11 | 6 |
rhombic lip | 2.98e-11 | 6 |
squamous epithelium | 4.10e-11 | 25 |
regional part of metencephalon | 4.43e-11 | 9 |
metencephalon | 4.43e-11 | 9 |
future metencephalon | 4.43e-11 | 9 |
segmental subdivision of nervous system | 1.84e-10 | 13 |
simple squamous epithelium | 4.74e-10 | 22 |
testis | 1.44e-08 | 8 |
segment of aorta | 1.68e-08 | 2 |
thoracic aorta | 1.68e-08 | 2 |