FFCP PHASE1:Hg19::chr11:118889153..118889232,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51399 | |EntrezGene=51399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19943 | |HGNC=19943 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y296 | |UniProt=Q9Y296 | ||
|association_with_transcript=-8bp_to_NM_016146,uc001pup.2,uc010ryn.1,uc010ryo.1,uc010ryp.1,uc010ryq.1_5end | |association_with_transcript=-8bp_to_NM_016146,uc001pup.2,uc010ryn.1,uc010ryo.1,uc010ryp.1,uc010ryq.1_5end | ||
|cluster_id=chr11:118889153..118889232,+ | |||
|description=CAGE_peak_2_at_TRAPPC4_5end | |description=CAGE_peak_2_at_TRAPPC4_5end | ||
|id=chr11:118889153..118889232,+ | |id=chr11:118889153..118889232,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.38e-25!115;UBERON:0001049!1.65e-17!57;UBERON:0005068!1.65e-17!57;UBERON:0006241!1.65e-17!57;UBERON:0007135!1.65e-17!57;UBERON:0005743!3.51e-17!86;UBERON:0000073!5.68e-17!94;UBERON:0001016!5.68e-17!94;UBERON:0001017!5.15e-16!82;UBERON:0002616!9.86e-15!59;UBERON:0002780!2.16e-14!41;UBERON:0001890!2.16e-14!41;UBERON:0006240!2.16e-14!41;UBERON:0003080!1.15e-13!42;UBERON:0000955!4.83e-13!69;UBERON:0006238!4.83e-13!69;UBERON:0002020!1.26e-11!34;UBERON:0003528!1.26e-11!34;UBERON:0001893!1.55e-11!34;UBERON:0002791!4.63e-11!33;UBERON:0002346!1.04e-10!90;UBERON:0001869!1.53e-10!32;UBERON:0003075!3.63e-10!86;UBERON:0007284!3.63e-10!86;UBERON:0003056!2.78e-09!61;UBERON:0002619!3.25e-08!22;UBERON:0000956!4.68e-08!25;UBERON:0000203!4.68e-08!25;UBERON:0001950!1.06e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!2.38e-25!115;UBERON:0001049!1.65e-17!57;UBERON:0005068!1.65e-17!57;UBERON:0006241!1.65e-17!57;UBERON:0007135!1.65e-17!57;UBERON:0005743!3.51e-17!86;UBERON:0000073!5.68e-17!94;UBERON:0001016!5.68e-17!94;UBERON:0001017!5.15e-16!82;UBERON:0002616!9.86e-15!59;UBERON:0002780!2.16e-14!41;UBERON:0001890!2.16e-14!41;UBERON:0006240!2.16e-14!41;UBERON:0003080!1.15e-13!42;UBERON:0000955!4.83e-13!69;UBERON:0006238!4.83e-13!69;UBERON:0002020!1.26e-11!34;UBERON:0003528!1.26e-11!34;UBERON:0001893!1.55e-11!34;UBERON:0002791!4.63e-11!33;UBERON:0002346!1.04e-10!90;UBERON:0001869!1.53e-10!32;UBERON:0003075!3.63e-10!86;UBERON:0007284!3.63e-10!86;UBERON:0003056!2.78e-09!61;UBERON:0002619!3.25e-08!22;UBERON:0000956!4.68e-08!25;UBERON:0000203!4.68e-08!25;UBERON:0001950!1.06e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;4.69e-11;53!UBERON:0002616;4.69e-11;53!UBERON:0002780;7.55e-11;41!UBERON:0001890;7.55e-11;41!UBERON:0003528;2.59e-10;34!UBERON:0002020;2.59e-10;34!UBERON:0001893;2.84e-10;34!UBERON:0001869;8.59e-10;32!UBERON:0002791;8.60e-10;32!UBERON:0000956;1.56e-08;25!UBERON:0000203;1.56e-08;25!UBERON:0002619;1.79e-08;22!UBERON:0007023;4.12e-08;114!UBERON:0001950;5.78e-08;20!UBERON:0001017;6.77e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0000073;4.69e-11;53!UBERON:0002616;4.69e-11;53!UBERON:0002780;7.55e-11;41!UBERON:0001890;7.55e-11;41!UBERON:0003528;2.59e-10;34!UBERON:0002020;2.59e-10;34!UBERON:0001893;2.84e-10;34!UBERON:0001869;8.59e-10;32!UBERON:0002791;8.60e-10;32!UBERON:0000956;1.56e-08;25!UBERON:0000203;1.56e-08;25!UBERON:0002619;1.79e-08;22!UBERON:0007023;4.12e-08;114!UBERON:0001950;5.78e-08;20!UBERON:0001017;6.77e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.16e-25,114;UBERON:0001049,5.17e-19,56;UBERON:0005068,5.17e-19,56;UBERON:0006241,5.17e-19,56;UBERON:0007135,5.17e-19,56;UBERON:0000073,1.20e-17,53;UBERON:0002616,1.20e-17,53;UBERON:0001017,3.34e-17,81;UBERON:0001016,1.15e-16,89;UBERON:0002780,5.08e-15,41;UBERON:0001890,5.08e-15,41;UBERON:0003080,5.08e-15,41;UBERON:0006240,5.08e-15,41;UBERON:0000955,9.71e-14,68;UBERON:0006238,9.71e-14,68;UBERON:0002346,2.72e-13,86;UBERON:0003075,1.03e-12,82;UBERON:0007284,1.03e-12,82;UBERON:0003528,4.04e-12,34;UBERON:0002020,4.04e-12,34;UBERON:0001893,5.04e-12,34;UBERON:0002791,5.04e-11,32;UBERON:0001869,5.56e-11,32;UBERON:0003056,5.71e-11,61;UBERON:0011216,2.61e-09,223;UBERON:0002619,1.53e-08,22;UBERON:0000956,2.25e-08,25;UBERON:0000203,2.25e-08,25;UBERON:0001950,5.29e-08,20 | |||
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| ||
|short_description=p2@TRAPPC4 | |short_description=p2@TRAPPC4 | ||
}} | }} |
Latest revision as of 02:15, 16 September 2015
Short description: | p2@TRAPPC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAPPC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_NM_016146, uc001pup.2, uc010ryn.1, uc010ryo.1, uc010ryp.1, uc010ryq.1_5end |
EntrezGene: | TRAPPC4 |
HGNC: | 19943 |
UniProt: | Q9Y296 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.16e-25 | 114 |
neural tube | 5.17e-19 | 56 |
neural rod | 5.17e-19 | 56 |
future spinal cord | 5.17e-19 | 56 |
neural keel | 5.17e-19 | 56 |
regional part of nervous system | 1.20e-17 | 53 |
regional part of brain | 1.20e-17 | 53 |
central nervous system | 3.34e-17 | 81 |
nervous system | 1.15e-16 | 89 |
regional part of forebrain | 5.08e-15 | 41 |
forebrain | 5.08e-15 | 41 |
anterior neural tube | 5.08e-15 | 41 |
future forebrain | 5.08e-15 | 41 |
brain | 9.71e-14 | 68 |
future brain | 9.71e-14 | 68 |
neurectoderm | 2.72e-13 | 86 |
neural plate | 1.03e-12 | 82 |
presumptive neural plate | 1.03e-12 | 82 |
brain grey matter | 4.04e-12 | 34 |
gray matter | 4.04e-12 | 34 |
telencephalon | 5.04e-12 | 34 |
regional part of telencephalon | 5.04e-11 | 32 |
cerebral hemisphere | 5.56e-11 | 32 |
pre-chordal neural plate | 5.71e-11 | 61 |
organ system subdivision | 2.61e-09 | 223 |
regional part of cerebral cortex | 1.53e-08 | 22 |
cerebral cortex | 2.25e-08 | 25 |
pallium | 2.25e-08 | 25 |
neocortex | 5.29e-08 | 20 |