FFCP PHASE1:Hg19::chr11:118829078..118829088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7379 | |EntrezGene=7379 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12579 | |HGNC=12579 | ||
|TSSclassifier=strong | |||
|UniProt=O00526 | |UniProt=O00526 | ||
|association_with_transcript=254bp_to_AF000562_5end | |association_with_transcript=254bp_to_AF000562_5end | ||
|cluster_id=chr11:118829078..118829088,+ | |||
|coexpression_cluster_id=C3092 | |coexpression_cluster_id=C3092 | ||
|description=CAGE_peak_10_at_UPK2_5end | |description=CAGE_peak_10_at_UPK2_5end | ||
Latest revision as of 02:09, 16 September 2015
| Short description: | p10@UPK2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_UPK2_5end |
| Coexpression cluster: | C3092_umbilical_heart_choriocarcinoma_rectal_Placental_MCF7_optic |
| Association with transcript: | 254bp_to_AF000562_5end |
| EntrezGene: | UPK2 |
| HGNC: | 12579 |
| UniProt: | O00526 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p10@UPK2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| placental epithelial cell | 4.09e-23 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| placenta | 1.03e-17 | 4 |
| allantois | 1.03e-17 | 4 |
| extraembryonic structure | 4.20e-12 | 24 |
| chorion | 9.89e-11 | 7 |
| umbilical cord | 6.13e-08 | 10 |
| blastocyst | 6.13e-08 | 10 |
| blastula | 6.13e-08 | 10 |
| bilaminar disc | 6.13e-08 | 10 |
| inner cell mass | 6.13e-08 | 10 |
| cleaving embryo | 6.13e-08 | 10 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| vascular disease | 1.23e-66 | 1 |
| ischemia | 1.23e-66 | 1 |
| extrinsic cardiomyopathy | 1.23e-66 | 1 |
| myocardial ischemia | 1.23e-66 | 1 |
| myocardial infarction | 1.23e-66 | 1 |
| heart disease | 3.61e-34 | 2 |
| cardiovascular system disease | 7.35e-18 | 4 |
Showing 1 to 7 of 7 entries
