FFCP PHASE1:Hg19::chr17:4844270..4844295,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4844270..4844295,+ to FFCP PHASE1:Hg19::chr17:4844270..4844295,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=52bp_to_uc002fzw.1,uc002fzx.2_5end | |||
|cluster_id=chr17:4844270..4844295,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_17_at_RNF167_5end | |||
|id=chr17:4844270..4844295,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.18e-27!18;CL:0000789!1.18e-27!18;CL:0002420!1.18e-27!18;CL:0002419!1.18e-27!18;CL:0000790!1.18e-27!18;CL:0000084!2.99e-25!25;CL:0000827!2.99e-25!25;CL:0000838!2.04e-22!52;CL:0000542!8.60e-22!53;CL:0000051!8.60e-22!53;CL:0000625!3.30e-18!11;CL:0000037!1.13e-16!172;CL:0000566!1.13e-16!172;CL:0000988!1.62e-15!182;CL:0002032!1.16e-14!165;CL:0000837!1.16e-14!165;CL:0000738!1.92e-13!140;CL:0002087!6.90e-13!119;CL:0002031!3.07e-10!124;CL:0000624!8.59e-10!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.88e-61;18!CL:0000789;1.88e-61;18!CL:0002419;1.88e-61;18!CL:0000084;5.78e-54;25!CL:0000625;8.75e-44;11!CL:0000542;3.88e-17;53!CL:0000624;2.55e-16;6!CL:0000623;1.79e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.86e-61,18;CL:0000789,3.86e-61,18;CL:0002420,3.86e-61,18;CL:0002419,3.86e-61,18;CL:0000790,3.86e-61,18;CL:0000084,1.18e-53,25;CL:0000827,1.18e-53,25;CL:0000625,1.25e-43,11;CL:0000838,4.77e-32,52;CL:0000542,2.44e-31,53;CL:0000051,2.44e-31,53;CL:0000624,2.51e-16,6;CL:0002087,5.22e-14,115;CL:0000037,9.77e-13,168;CL:0000623,1.05e-12,3;CL:0000825,1.05e-12,3;CL:0000738,3.75e-12,136;CL:0000988,9.41e-12,177;CL:0002032,2.47e-11,161;CL:0000837,2.47e-11,161;CL:0002031,1.00e-10,120;CL:0000893,5.70e-09,2;CL:0002489,5.70e-09,2;CL:0000809,5.70e-09,2;CL:0000808,5.70e-09,2;CL:0000894,5.70e-09,2;CL:0000806,5.70e-09,2;CL:0000807,5.70e-09,2;CL:0000805,5.70e-09,2;CL:0002425,5.70e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.88e-61;18!CL:0000051;3.88e-17;53!CL:0002425;3.72e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.62e-10!7;UBERON:0000178!1.65e-07!15;UBERON:0000179!1.65e-07!15;UBERON:0000463!1.65e-07!15;UBERON:0002370!6.24e-07!4;UBERON:0005058!6.24e-07!4;UBERON:0009113!6.24e-07!4;UBERON:0003295!6.24e-07!4;UBERON:0005562!6.24e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.51e-15;15!UBERON:0000179;2.51e-15;15!UBERON:0000463;2.51e-15;15!UBERON:0002390;6.22e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.90e-15,15;UBERON:0000179,1.90e-15,15;UBERON:0000463,1.90e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0,1.57345710739562,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0.0774672005803016,0,0.587200878669695,0.553995408531877,0.200544447470142,0.651032612147555,0,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,1.180258620683,1.57204305099666,1.43921049299656,1.5046784585161,0.32592226663359,0.946895611469467,1.94826728407911,9.46988883523975,2.94605907474837,2.21533894583621,3.24964636518019,6.02029202710673,6.11278933531428,5.42645085192131,3.86890024900188,6.66547097190621,1.4828656316206,0,0,11.4442436124542,7.2811893784365,4.46715679127419,6.07247260846807,6.05274287215784,6.51083453856419,8.55406840003537,4.06552821509986,4.8634912238679,1.24930726552346,6.15620855314444,5.74789597844733,3.22570789159572,2.40696176205157,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.528290604079356,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,1.12085143993527,2.36436912242313,1.94064817373566,2.56686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,2.27858874869665,1.66762242820452,2.05681136543097,1.29694662238543,0,3.17250070517708,0,0,0,0,0.144269212976445,0,0.318852545457645,0,1.34053759092657,1.48171507906718,0.324621940274555,0.280797178113459,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.710478008196067,0.620747142958579,0,0,0,0,0,0.404112318087525,0.286888821570705,0,0,0,0,0,0,0,0,0,0.805095174364105,0.961705476909699 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.164201178899891,0,1.57345710739562,0.383829398097213,0.619264493264304,0,0.30120591877825,0,0.0774672005803016,0,0.587200878669695,0.553995408531877,0.200544447470142,0.651032612147555,0,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,1.180258620683,1.57204305099666,1.43921049299656,1.5046784585161,0.32592226663359,0.946895611469467,1.94826728407911,9.46988883523975,2.94605907474837,2.21533894583621,3.24964636518019,6.02029202710673,6.11278933531428,5.42645085192131,3.86890024900188,6.66547097190621,1.4828656316206,0,0,11.4442436124542,7.2811893784365,4.46715679127419,6.07247260846807,6.05274287215784,6.51083453856419,8.55406840003537,4.06552821509986,4.8634912238679,1.24930726552346,6.15620855314444,5.74789597844733,3.22570789159572,2.40696176205157,2.02754165435919,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0.528290604079356,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0,0,0,1.12085143993527,2.36436912242313,1.94064817373566,2.56686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,0.647142602455851,1.49418580924822,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,1.30012049207304,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,2.27858874869665,1.66762242820452,2.05681136543097,1.29694662238543,0,3.17250070517708,0,0,0,0,0.144269212976445,0,0.318852545457645,0,1.34053759092657,1.48171507906718,0.324621940274555,0.280797178113459,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,1.33228787199128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,1.39991177098451,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0,0.469919589899268,0.322289439867886,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.213233981900981,0,0.710478008196067,0.620747142958579,0,0,0,0,0,0.404112318087525,0.286888821570705,0,0,0,0,0,0,0,0,0,0.805095174364105,0.961705476909699 | ||
|short_description=p17@RNF167 | |||
}} | }} |
Latest revision as of 02:01, 16 September 2015
Short description: | p17@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_RNF167_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 52bp_to_uc002fzw.1, uc002fzx.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.90e-15 | 15 |
haemolymphatic fluid | 1.90e-15 | 15 |
organism substance | 1.90e-15 | 15 |