FFCP PHASE1:Hg19::chrX:55620448..55620457,+: Difference between revisions
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|id=chrX:55620448..55620457,+
|short_description=p@chrX:55620448..55620457,+
|description=CAGE_peak_at_chrX:55620448..55620457,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
| | |EntrezGene=139628 | ||
| | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:55620448..55620457,+ | |||
|coexpression_cluster_id=C2959 | |||
|description=CAGE_peak_4_at_FOXR2_5end | |||
|id=chrX:55620448..55620457,+ | |||
|ontology_enrichment_celltype=CL:0002178!6.14e-07!3;CL:0000322!7.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.59e-12;3!CL:0002178;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.07e-12,3;CL:0000322,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0007123;6.55e-08;5 | |||
|ontology_enrichment_disease=DOID:3910!1.22e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3910;9.07e-18;2!DOID:3908;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,1.27e-17,2;DOID:3908,7.49e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004903!1.22e-09!2;UBERON:0002173!1.22e-09!2;UBERON:0002186!1.22e-09!2;UBERON:0000473!4.19e-09!8;UBERON:0003135!7.37e-07!11;UBERON:0004821!7.70e-07!3;UBERON:0003215!7.70e-07!3;UBERON:0002299!7.70e-07!3;UBERON:0006524!7.70e-07!3;UBERON:0008874!7.70e-07!3;UBERON:0002169!7.70e-07!3;UBERON:0004894!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.07e-18;2!UBERON:0002173;9.07e-18;2!UBERON:0002186;9.07e-18;2!UBERON:0004821;2.59e-12;3!UBERON:0007499;2.59e-12;3!UBERON:0003215;2.59e-12;3!UBERON:0010368;2.59e-12;3!UBERON:0009911;2.59e-12;3!UBERON:0002299;2.59e-12;3!UBERON:0006524;2.59e-12;3!UBERON:0008874;2.59e-12;3!UBERON:0002169;2.59e-12;3!UBERON:0004894;2.59e-12;3!UBERON:0009856;1.44e-09;4!UBERON:0002046;6.55e-08;5!UBERON:0000945;6.55e-08;5!UBERON:0010039;6.55e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5 | |||
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|short_description=p4@FOXR2 | |||
}} | }} |
Latest revision as of 01:58, 16 September 2015
Short description: | p4@FOXR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXR2_5end |
Coexpression cluster: | C2959_fibrosarcoma_gastric_teratocarcinoma_thyroid_bronchioalveolar_pagetoid_adult |
Association with transcript: | NA |
EntrezGene: | FOXR2 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.07e-12 | 3 |
pneumocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 7.49e-08 | 5 |