FFCP PHASE1:Hg19::chr10:104404218..104404252,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:104404218..104404252,+ to FFCP PHASE1:Hg19::chr10:104404218..104404252,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81603 | |EntrezGene=81603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15579 | |HGNC=15579 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZR9,Q5JSM3 | |UniProt=Q9BZR9,Q5JSM3 | ||
|association_with_transcript=0bp_to_ENST00000302424,ENST00000369896,NM_030912,uc001kvz.2_5end | |||
|cluster_id=chr10:104404218..104404252,+ | |||
|description=CAGE_peak_1_at_TRIM8_5end | |||
|id=chr10:104404218..104404252,+ | |||
|ontology_enrichment_celltype=CL:0000838!8.61e-25!52;CL:0000542!8.84e-25!53;CL:0000051!8.84e-25!53;CL:0000037!1.01e-23!172;CL:0000566!1.01e-23!172;CL:0000988!1.82e-22!182;CL:0002032!3.15e-21!165;CL:0000837!3.15e-21!165;CL:0000738!2.69e-19!140;CL:0002087!9.88e-14!119;CL:0002031!1.26e-12!124;CL:0000945!1.30e-12!24;CL:0000826!1.30e-12!24;CL:0000084!7.11e-12!25;CL:0000827!7.11e-12!25;CL:0000791!4.98e-10!18;CL:0000789!4.98e-10!18;CL:0002420!4.98e-10!18;CL:0002419!4.98e-10!18;CL:0000790!4.98e-10!18;CL:0000236!3.14e-08!14;CL:0000625!4.11e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;4.12e-15;53!CL:0000945;7.42e-13;24!CL:0000084;4.76e-12;25!CL:0000791;3.36e-10;18!CL:0000789;3.36e-10;18!CL:0002419;3.36e-10;18!CL:0000236;1.31e-08;13!CL:0000625;3.10e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.13e-25,52;CL:0000542,7.32e-25,53;CL:0000051,7.32e-25,53;CL:0000037,1.98e-23,168;CL:0000988,1.30e-22,177;CL:0002032,6.19e-21,161;CL:0000837,6.19e-21,161;CL:0000738,4.97e-19,136;CL:0002087,1.52e-13,115;CL:0000945,1.19e-12,24;CL:0000826,1.19e-12,24;CL:0002031,2.40e-12,120;CL:0000084,6.54e-12,25;CL:0000827,6.54e-12,25;CL:0000791,4.65e-10,18;CL:0000789,4.65e-10,18;CL:0002420,4.65e-10,18;CL:0002419,4.65e-10,18;CL:0000790,4.65e-10,18;CL:0000236,2.97e-08,14;CL:0000625,3.93e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000051;4.12e-15;53!CL:0000790;3.36e-10;18 | |||
|ontology_enrichment_disease=DOID:2531!3.70e-10!51;DOID:0060083!3.70e-10!51;DOID:1240!1.22e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.45e-10,51;DOID:0060083,3.45e-10,51;DOID:1240,1.16e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.64e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.16e-13,114 | |||
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| ||
|short_description=p1@TRIM8 | |||
}} | }} |
Latest revision as of 01:51, 16 September 2015
Short description: | p1@TRIM8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302424, ENST00000369896, NM_030912, uc001kvz.2_5end |
EntrezGene: | TRIM8 |
HGNC: | 15579 |
UniProt: | Q9BZR9Q5JSM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.13e-25 | 52 |
lymphocyte | 7.32e-25 | 53 |
common lymphoid progenitor | 7.32e-25 | 53 |
hematopoietic stem cell | 1.98e-23 | 168 |
hematopoietic cell | 1.30e-22 | 177 |
hematopoietic oligopotent progenitor cell | 6.19e-21 | 161 |
hematopoietic multipotent progenitor cell | 6.19e-21 | 161 |
leukocyte | 4.97e-19 | 136 |
nongranular leukocyte | 1.52e-13 | 115 |
lymphocyte of B lineage | 1.19e-12 | 24 |
pro-B cell | 1.19e-12 | 24 |
hematopoietic lineage restricted progenitor cell | 2.40e-12 | 120 |
T cell | 6.54e-12 | 25 |
pro-T cell | 6.54e-12 | 25 |
mature alpha-beta T cell | 4.65e-10 | 18 |
alpha-beta T cell | 4.65e-10 | 18 |
immature T cell | 4.65e-10 | 18 |
mature T cell | 4.65e-10 | 18 |
immature alpha-beta T cell | 4.65e-10 | 18 |
B cell | 2.97e-08 | 14 |
CD8-positive, alpha-beta T cell | 3.93e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.16e-13 | 114 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.45e-10 | 51 |
immune system cancer | 3.45e-10 | 51 |
leukemia | 1.16e-07 | 39 |