FFCP PHASE1:Hg19::chr8:125577043..125577056,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9788 | |EntrezGene=9788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20443 | |HGNC=20443 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000522722_5end | |association_with_transcript=0bp_to_ENST00000522722_5end | ||
|cluster_id=chr8:125577043..125577056,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_10_at_MTSS1_5end | |description=CAGE_peak_10_at_MTSS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!3.11e-36!53;CL:0000051!3.11e-36!53;CL:0000838!3.64e-35!52;CL:0000791!2.40e-28!18;CL:0000789!2.40e-28!18;CL:0002420!2.40e-28!18;CL:0002419!2.40e-28!18;CL:0000790!2.40e-28!18;CL:0000084!4.13e-25!25;CL:0000827!4.13e-25!25;CL:0002087!1.40e-19!119;CL:0000625!1.85e-18!11;CL:0000037!1.88e-18!172;CL:0000566!1.88e-18!172;CL:0000738!5.32e-18!140;CL:0000988!1.88e-16!182;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!3.93e-15!124;CL:0000236!1.34e-13!14;CL:0000624!2.36e-10!6;CL:0000945!3.54e-09!24;CL:0000826!3.54e-09!24 | |ontology_enrichment_celltype=CL:0000542!3.11e-36!53;CL:0000051!3.11e-36!53;CL:0000838!3.64e-35!52;CL:0000791!2.40e-28!18;CL:0000789!2.40e-28!18;CL:0002420!2.40e-28!18;CL:0002419!2.40e-28!18;CL:0000790!2.40e-28!18;CL:0000084!4.13e-25!25;CL:0000827!4.13e-25!25;CL:0002087!1.40e-19!119;CL:0000625!1.85e-18!11;CL:0000037!1.88e-18!172;CL:0000566!1.88e-18!172;CL:0000738!5.32e-18!140;CL:0000988!1.88e-16!182;CL:0002032!3.08e-16!165;CL:0000837!3.08e-16!165;CL:0002031!3.93e-15!124;CL:0000236!1.34e-13!14;CL:0000624!2.36e-10!6;CL:0000945!3.54e-09!24;CL:0000826!3.54e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.49e-42;18!CL:0000789;1.49e-42;18!CL:0002419;1.49e-42;18!CL:0000084;4.11e-33;25!CL:0000625;1.51e-28;11!CL:0000542;8.20e-24;53!CL:0000624;2.22e-18;6!CL:0000236;5.91e-13;13!CL:0000898;3.29e-10;3!CL:0000623;8.41e-10;3!CL:0000226;1.71e-09;3!CL:0000842;1.71e-09;3!CL:0002087;4.26e-08;104!CL:0000815;3.92e-07;2!CL:0000792;3.92e-07;2!CL:0002677;3.92e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;1.49e-42;18!CL:0000789;1.49e-42;18!CL:0002419;1.49e-42;18!CL:0000084;4.11e-33;25!CL:0000625;1.51e-28;11!CL:0000542;8.20e-24;53!CL:0000624;2.22e-18;6!CL:0000236;5.91e-13;13!CL:0000898;3.29e-10;3!CL:0000623;8.41e-10;3!CL:0000226;1.71e-09;3!CL:0000842;1.71e-09;3!CL:0002087;4.26e-08;104!CL:0000815;3.92e-07;2!CL:0000792;3.92e-07;2!CL:0002677;3.92e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.73e-42,18;CL:0000789,1.73e-42,18;CL:0002420,1.73e-42,18;CL:0002419,1.73e-42,18;CL:0000790,1.73e-42,18;CL:0000838,2.75e-39,52;CL:0000542,2.12e-38,53;CL:0000051,2.12e-38,53;CL:0000084,4.36e-33,25;CL:0000827,4.36e-33,25;CL:0000625,1.57e-28,11;CL:0002087,1.13e-18,115;CL:0000624,2.51e-18,6;CL:0000738,6.44e-17,136;CL:0002031,9.38e-14,120;CL:0000037,4.47e-13,168;CL:0000988,5.53e-12,177;CL:0000236,8.03e-12,14;CL:0000898,3.67e-10,3;CL:0002032,3.95e-10,161;CL:0000837,3.95e-10,161;CL:0000623,7.93e-10,3;CL:0000825,7.93e-10,3;CL:0000226,1.25e-09,3;CL:0000842,1.25e-09,3;CL:0000815,4.37e-07,2;CL:0000792,4.37e-07,2;CL:0002677,4.37e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.49e-42;18!CL:0000051;8.20e-24;53 | |ontology_enrichment_development_v019=CL:0000790;1.49e-42;18!CL:0000051;8.20e-24;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.63e-14!15;UBERON:0000179!3.63e-14!15;UBERON:0000463!3.63e-14!15;UBERON:0004177!8.96e-08!7;UBERON:0002370!6.05e-07!4;UBERON:0005058!6.05e-07!4;UBERON:0009113!6.05e-07!4;UBERON:0003295!6.05e-07!4;UBERON:0005562!6.05e-07!4 | |ontology_enrichment_uberon=UBERON:0000178!3.63e-14!15;UBERON:0000179!3.63e-14!15;UBERON:0000463!3.63e-14!15;UBERON:0004177!8.96e-08!7;UBERON:0002370!6.05e-07!4;UBERON:0005058!6.05e-07!4;UBERON:0009113!6.05e-07!4;UBERON:0003295!6.05e-07!4;UBERON:0005562!6.05e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-22;15!UBERON:0000179;1.31e-22;15!UBERON:0000463;1.31e-22;15!UBERON:0002390;4.28e-10;32!UBERON:0002193;2.18e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.31e-22;15!UBERON:0000179;1.31e-22;15!UBERON:0000463;1.31e-22;15!UBERON:0002390;4.28e-10;32!UBERON:0002193;2.18e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.42e-23,15;UBERON:0000179,8.42e-23,15;UBERON:0000463,8.42e-23,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0.774672005803016,0,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,1.63841583378639,3.55803701545422,0.853460445133014,2.00197993518006,0,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,1.14681968437569,0,1.12101712596307,0,1.180258620683,5.89516144123747,3.49522548299166,5.68434084328306,2.28145586643513,5.20792586308207,1.94826728407911,7.13026924065111,3.53527088969805,3.1014745241707,1.62482318259009,5.25174410875268,2.86130564631732,5.75532666112866,6.35605040907451,7.82468331484642,5.19002971067211,4.81573490561484,1.04535523804977,11.5575529551518,7.2811893784365,7.21617635513523,5.56643322442906,9.2383970153988,11.7195021694155,10.4549724889321,3.01150238155546,4.60751800155906,7.49584359314075,10.6549763419808,10.6746639599736,4.23374160771938,2.67440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,4.13764596424047,3.88129634747131,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.68798433959754,1.72571360654893,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,5.35246044999663,1.70894156152249,2.38231775457789,3.70226045777575,0.648473311192717,3.7802200606668,8.72437693923697,0,0,0,0.371606350251437,0,1.35169502361987,0.159426272728822,0,0,1.69338866179106,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.976940477010201,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.939839179798536,0.515663103788617,0,0,0,0,0.730336388246517,1.83491713361816,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,2.45437857376823,0.806971285846153,0,0,0,0.217716747896961,0,1.34704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0.774672005803016,0,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,1.63841583378639,3.55803701545422,0.853460445133014,2.00197993518006,0,0.661044872784862,0.954053754535364,1.1384259382189,1.17447437874188,1.14681968437569,0,1.12101712596307,0,1.180258620683,5.89516144123747,3.49522548299166,5.68434084328306,2.28145586643513,5.20792586308207,1.94826728407911,7.13026924065111,3.53527088969805,3.1014745241707,1.62482318259009,5.25174410875268,2.86130564631732,5.75532666112866,6.35605040907451,7.82468331484642,5.19002971067211,4.81573490561484,1.04535523804977,11.5575529551518,7.2811893784365,7.21617635513523,5.56643322442906,9.2383970153988,11.7195021694155,10.4549724889321,3.01150238155546,4.60751800155906,7.49584359314075,10.6549763419808,10.6746639599736,4.23374160771938,2.67440195783507,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,4.13764596424047,3.88129634747131,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.68798433959754,1.72571360654893,2.45473382947922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,5.35246044999663,1.70894156152249,2.38231775457789,3.70226045777575,0.648473311192717,3.7802200606668,8.72437693923697,0,0,0,0.371606350251437,0,1.35169502361987,0.159426272728822,0,0,1.69338866179106,0,0,0,0,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0.976940477010201,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.939839179798536,0.515663103788617,0,0,0,0,0.730336388246517,1.83491713361816,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,2.45437857376823,0.806971285846153,0,0,0,0.217716747896961,0,1.34704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p10@MTSS1 | |short_description=p10@MTSS1 | ||
}} | }} |
Latest revision as of 01:51, 16 September 2015
Short description: | p10@MTSS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MTSS1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000522722_5end |
EntrezGene: | MTSS1 |
HGNC: | 20443 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.73e-42 | 18 |
alpha-beta T cell | 1.73e-42 | 18 |
immature T cell | 1.73e-42 | 18 |
mature T cell | 1.73e-42 | 18 |
immature alpha-beta T cell | 1.73e-42 | 18 |
lymphoid lineage restricted progenitor cell | 2.75e-39 | 52 |
lymphocyte | 2.12e-38 | 53 |
common lymphoid progenitor | 2.12e-38 | 53 |
T cell | 4.36e-33 | 25 |
pro-T cell | 4.36e-33 | 25 |
CD8-positive, alpha-beta T cell | 1.57e-28 | 11 |
nongranular leukocyte | 1.13e-18 | 115 |
CD4-positive, alpha-beta T cell | 2.51e-18 | 6 |
leukocyte | 6.44e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 9.38e-14 | 120 |
hematopoietic stem cell | 4.47e-13 | 168 |
hematopoietic cell | 5.53e-12 | 177 |
B cell | 8.03e-12 | 14 |
naive T cell | 3.67e-10 | 3 |
hematopoietic oligopotent progenitor cell | 3.95e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-10 | 161 |
natural killer cell | 7.93e-10 | 3 |
pro-NK cell | 7.93e-10 | 3 |
single nucleate cell | 1.25e-09 | 3 |
mononuclear cell | 1.25e-09 | 3 |
regulatory T cell | 4.37e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.37e-07 | 2 |
naive regulatory T cell | 4.37e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.42e-23 | 15 |
haemolymphatic fluid | 8.42e-23 | 15 |
organism substance | 8.42e-23 | 15 |