FFCP PHASE1:Hg19::chr17:4843352..4843411,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H6Y7 | |UniProt=Q9H6Y7 | ||
|association_with_transcript=-11bp_to_ENST00000262482_5end | |association_with_transcript=-11bp_to_ENST00000262482_5end | ||
|cluster_id=chr17:4843352..4843411,+ | |||
|description=CAGE_peak_4_at_RNF167_5end | |description=CAGE_peak_4_at_RNF167_5end | ||
|id=chr17:4843352..4843411,+ | |id=chr17:4843352..4843411,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-25!115;UBERON:0001049!1.50e-15!57;UBERON:0005068!1.50e-15!57;UBERON:0006241!1.50e-15!57;UBERON:0007135!1.50e-15!57;UBERON:0000064!1.02e-14!219;UBERON:0003075!1.07e-14!86;UBERON:0007284!1.07e-14!86;UBERON:0002346!6.02e-14!90;UBERON:0005743!4.87e-13!86;UBERON:0001017!1.51e-12!82;UBERON:0004121!1.51e-12!169;UBERON:0000924!3.46e-12!173;UBERON:0006601!3.46e-12!173;UBERON:0000481!9.22e-12!347;UBERON:0000073!1.17e-11!94;UBERON:0001016!1.17e-11!94;UBERON:0002616!1.23e-11!59;UBERON:0003056!3.84e-11!61;UBERON:0003080!1.06e-10!42;UBERON:0002780!2.05e-10!41;UBERON:0001890!2.05e-10!41;UBERON:0006240!2.05e-10!41;UBERON:0000955!3.63e-10!69;UBERON:0006238!3.63e-10!69;UBERON:0000033!5.30e-10!123;UBERON:0000153!8.49e-10!129;UBERON:0007811!8.49e-10!129;UBERON:0000477!1.41e-09!286;UBERON:0004111!1.74e-09!241;UBERON:0000119!2.47e-09!312;UBERON:0000483!3.74e-09!309;UBERON:0000062!4.43e-09!511;UBERON:0000025!1.91e-08!194;UBERON:0000468!3.53e-08!659;UBERON:0000475!4.85e-08!365;UBERON:0000922!2.03e-07!612;UBERON:0000063!3.30e-07!97;UBERON:0001737!3.72e-07!9;UBERON:0000480!3.80e-07!626;UBERON:0001893!3.84e-07!34;UBERON:0002020!4.19e-07!34;UBERON:0003528!4.19e-07!34;UBERON:0000467!5.96e-07!625;UBERON:0002791!7.60e-07!33;UBERON:0001048!9.14e-07!168 | |ontology_enrichment_uberon=UBERON:0007023!1.38e-25!115;UBERON:0001049!1.50e-15!57;UBERON:0005068!1.50e-15!57;UBERON:0006241!1.50e-15!57;UBERON:0007135!1.50e-15!57;UBERON:0000064!1.02e-14!219;UBERON:0003075!1.07e-14!86;UBERON:0007284!1.07e-14!86;UBERON:0002346!6.02e-14!90;UBERON:0005743!4.87e-13!86;UBERON:0001017!1.51e-12!82;UBERON:0004121!1.51e-12!169;UBERON:0000924!3.46e-12!173;UBERON:0006601!3.46e-12!173;UBERON:0000481!9.22e-12!347;UBERON:0000073!1.17e-11!94;UBERON:0001016!1.17e-11!94;UBERON:0002616!1.23e-11!59;UBERON:0003056!3.84e-11!61;UBERON:0003080!1.06e-10!42;UBERON:0002780!2.05e-10!41;UBERON:0001890!2.05e-10!41;UBERON:0006240!2.05e-10!41;UBERON:0000955!3.63e-10!69;UBERON:0006238!3.63e-10!69;UBERON:0000033!5.30e-10!123;UBERON:0000153!8.49e-10!129;UBERON:0007811!8.49e-10!129;UBERON:0000477!1.41e-09!286;UBERON:0004111!1.74e-09!241;UBERON:0000119!2.47e-09!312;UBERON:0000483!3.74e-09!309;UBERON:0000062!4.43e-09!511;UBERON:0000025!1.91e-08!194;UBERON:0000468!3.53e-08!659;UBERON:0000475!4.85e-08!365;UBERON:0000922!2.03e-07!612;UBERON:0000063!3.30e-07!97;UBERON:0001737!3.72e-07!9;UBERON:0000480!3.80e-07!626;UBERON:0001893!3.84e-07!34;UBERON:0002020!4.19e-07!34;UBERON:0003528!4.19e-07!34;UBERON:0000467!5.96e-07!625;UBERON:0002791!7.60e-07!33;UBERON:0001048!9.14e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.81e-08;53!UBERON:0002616;2.81e-08;53!UBERON:0002780;9.30e-08;41!UBERON:0001890;9.30e-08;41!UBERON:0007023;1.08e-07;114!UBERON:0001737;3.23e-07;9!UBERON:0001557;3.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.85e-25,114;UBERON:0003075,1.05e-15,82;UBERON:0007284,1.05e-15,82;UBERON:0001049,3.21e-15,56;UBERON:0005068,3.21e-15,56;UBERON:0006241,3.21e-15,56;UBERON:0007135,3.21e-15,56;UBERON:0002346,7.18e-15,86;UBERON:0010371,8.23e-15,104;UBERON:0000073,3.79e-14,53;UBERON:0002616,3.79e-14,53;UBERON:0011216,7.52e-14,223;UBERON:0001017,2.99e-12,81;UBERON:0004121,6.22e-12,171;UBERON:0000924,6.22e-12,171;UBERON:0006601,6.22e-12,171;UBERON:0001016,7.53e-11,89;UBERON:0003056,9.12e-11,61;UBERON:0002780,2.21e-10,41;UBERON:0001890,2.21e-10,41;UBERON:0003080,2.21e-10,41;UBERON:0006240,2.21e-10,41;UBERON:0010314,4.00e-10,132;UBERON:0000955,7.02e-10,68;UBERON:0006238,7.02e-10,68;UBERON:0004111,2.30e-09,240;UBERON:0000119,2.87e-09,309;UBERON:0000483,4.34e-09,306;UBERON:0000025,1.49e-08,192;UBERON:0001048,5.97e-08,160;UBERON:0000922,2.90e-07,592;UBERON:0001737,3.70e-07,9;UBERON:0001893,4.11e-07,34;UBERON:0003528,4.49e-07,34;UBERON:0002020,4.49e-07,34 | |||
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| ||
|short_description=p4@RNF167 | |short_description=p4@RNF167 | ||
}} | }} |
Latest revision as of 01:46, 16 September 2015
Short description: | p4@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF167_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000262482_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | Q9H6Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.85e-25 | 114 |
neural plate | 1.05e-15 | 82 |
presumptive neural plate | 1.05e-15 | 82 |
neural tube | 3.21e-15 | 56 |
neural rod | 3.21e-15 | 56 |
future spinal cord | 3.21e-15 | 56 |
neural keel | 3.21e-15 | 56 |
neurectoderm | 7.18e-15 | 86 |
ecto-epithelium | 8.23e-15 | 104 |
regional part of nervous system | 3.79e-14 | 53 |
regional part of brain | 3.79e-14 | 53 |
organ system subdivision | 7.52e-14 | 223 |
central nervous system | 2.99e-12 | 81 |
ectoderm-derived structure | 6.22e-12 | 171 |
ectoderm | 6.22e-12 | 171 |
presumptive ectoderm | 6.22e-12 | 171 |
nervous system | 7.53e-11 | 89 |
pre-chordal neural plate | 9.12e-11 | 61 |
regional part of forebrain | 2.21e-10 | 41 |
forebrain | 2.21e-10 | 41 |
anterior neural tube | 2.21e-10 | 41 |
future forebrain | 2.21e-10 | 41 |
structure with developmental contribution from neural crest | 4.00e-10 | 132 |
brain | 7.02e-10 | 68 |
future brain | 7.02e-10 | 68 |
anatomical conduit | 2.30e-09 | 240 |
cell layer | 2.87e-09 | 309 |
epithelium | 4.34e-09 | 306 |
tube | 1.49e-08 | 192 |
primordium | 5.97e-08 | 160 |
embryo | 2.90e-07 | 592 |
larynx | 3.70e-07 | 9 |
telencephalon | 4.11e-07 | 34 |
brain grey matter | 4.49e-07 | 34 |
gray matter | 4.49e-07 | 34 |