FFCP PHASE1:Hg19::chr17:4843338..4843349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26001 | |EntrezGene=26001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24544 | |HGNC=24544 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_uc002fzq.2,uc002fzr.2_5end | |association_with_transcript=35bp_to_uc002fzq.2,uc002fzr.2_5end | ||
|cluster_id=chr17:4843338..4843349,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_21_at_RNF167_5end | |description=CAGE_peak_21_at_RNF167_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!2.47e-07!5 | |ontology_enrichment_celltype=CL:0002322!2.47e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.89e-12;3!CL:0000307;2.89e-12;3 | |ontology_enrichment_celltype_v019=CL:0002567;2.89e-12;3!CL:0000307;2.89e-12;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.59e-12,3;CL:0000068,3.24e-12,3;CL:0000069,3.24e-12,3;CL:0000307,3.24e-12,3;CL:0000377,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!CL:0000377;2.89e-12;3 | |ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!CL:0000377;2.89e-12;3 | ||
|ontology_enrichment_disease=DOID:305!5.63e-07!106 | |ontology_enrichment_disease=DOID:305!5.63e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.50e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!6.50e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,2.0956652079634,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.732186172644509,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.365921118388786,0.927708378250397,0.580969714347592,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,0.224262168690721,0,0,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0.330037999682352,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.300646838828985,0.414752765588989,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.19351266257817,0.292357268344742,0.0821154570532092,0,0.0882561266915003,0.451961481561065,0,0,0.0633107959558787,0.782205530939212,0,0,0,0.288180834308212,0,0,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.470284307407084,0,0,0.0787831823072236,0,0.13480708770837,0.393709926058995,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0.335434687599266,0,0.157363764404994,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.258565912723101,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0.936669811613763,0.434763085832475,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.253663240775627,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0.115233987555779,0,0.203909198930495,0.197318320688547,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0.215927591218621,0,0.285906176706625,0.158013611732727,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0.659643100472575,0,0.0771741581079447,0,0,0.245148321753905,0.235676547101626,0,0.297046400327086,0,0.169927114687817,0,0,0.0999411559249289,0,0,0.320965466756673,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0.218531143927391,0.126698501011437,0.203977659483963,0.26721740526556,0.275684698604535,0.250707539292375,5.07717278062204,5.62724673327975,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0,0,0,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 | ||
|short_description=p21@RNF167 | |short_description=p21@RNF167 | ||
}} | }} |
Latest revision as of 01:45, 16 September 2015
Short description: | p21@RNF167 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RNF167_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 35bp_to_uc002fzq.2, uc002fzr.2_5end |
EntrezGene: | RNF167 |
HGNC: | 24544 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.59e-12 | 3 |
duct epithelial cell | 3.24e-12 | 3 |
branched duct epithelial cell | 3.24e-12 | 3 |
tracheal epithelial cell | 3.24e-12 | 3 |
tracheoblast | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |