FFCP PHASE1:Hg19::chrX:54522624..54522641,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:54522624..54522641,-
|short_description=p4@FGD1
|description=CAGE_peak_4_at_FGD1_5end
|association_with_transcript=-25bp_to_ENST00000375135,NM_004463,uc004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2245 | |EntrezGene=2245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3663 | |HGNC=3663 | ||
|TSSclassifier=strong | |||
|UniProt=P98174 | |UniProt=P98174 | ||
|association_with_transcript=-25bp_to_ENST00000375135,NM_004463,uc004dtg.2_5end | |||
|cluster_id=chrX:54522624..54522641,- | |||
|description=CAGE_peak_4_at_FGD1_5end | |||
|id=chrX:54522624..54522641,- | |||
|ontology_enrichment_celltype=CL:0000055!2.18e-24!180;CL:0000133!9.08e-13!59;CL:0000057!3.92e-12!75;CL:0000333!2.50e-10!41;CL:0002321!3.90e-10!248;CL:0000220!8.72e-10!246;CL:0000221!1.18e-09!71;CL:0000066!5.95e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.65e-12,76;CL:0000133,1.67e-11,59;CL:0000333,7.49e-10,41;CL:0000221,7.59e-08,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!2.46e-08!22;DOID:2994!2.46e-08!22;DOID:1115!1.26e-07!20;DOID:0050687!3.31e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.16e-09;22!DOID:2994;5.16e-09;22!DOID:1115;4.09e-07;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-09,22;DOID:2994,4.01e-09,22;DOID:1115,1.42e-07,20 | |||
|ontology_enrichment_uberon=UBERON:0000475!8.70e-10!365;UBERON:0000468!1.47e-09!659;UBERON:0000481!5.18e-08!347;UBERON:0000924!6.59e-07!173;UBERON:0006601!6.59e-07!173 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@FGD1 | |||
}} | }} |
Latest revision as of 01:10, 16 September 2015
Short description: | p4@FGD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FGD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000375135, NM_004463, uc004dtg.2_5end |
EntrezGene: | FGD1 |
HGNC: | 3663 |
UniProt: | P98174 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.65e-12 | 76 |
neurectodermal cell | 1.67e-11 | 59 |
migratory neural crest cell | 7.49e-10 | 41 |
ectodermal cell | 7.59e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-09 | 22 |
germ cell cancer | 4.01e-09 | 22 |
sarcoma | 1.42e-07 | 20 |