FFCP PHASE1:Hg19::chr12:105478218..105478244,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=160428 | |EntrezGene=160428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26777 | |HGNC=26777 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000552270,ENST00000552427_5end | |association_with_transcript=0bp_to_ENST00000552270,ENST00000552427_5end | ||
|cluster_id=chr12:105478218..105478244,- | |||
|coexpression_cluster_id=C2179 | |||
|description=CAGE_peak_1_at_ALDH1L2_5end | |description=CAGE_peak_1_at_ALDH1L2_5end | ||
|id=chr12:105478218..105478244,- | |id=chr12:105478218..105478244,- | ||
|ontology_enrichment_celltype=CL:0000055!3.84e-37!180;CL:0000057!4.01e-26!75;CL:0000680!1.86e-14!57;CL:0000056!1.86e-14!57;CL:0000355!1.86e-14!57;CL:0000187!8.24e-14!54;CL:0002620!5.18e-12!23;CL:0000183!1.78e-11!59;CL:0000393!6.13e-11!60;CL:0000211!6.13e-11!60;CL:0000192!3.91e-10!42;CL:0000514!3.91e-10!42;CL:0000359!1.08e-07!32;CL:0002371!1.72e-07!591;CL:0002334!9.20e-07!12;CL:0000144!9.64e-07!625 | |ontology_enrichment_celltype=CL:0000055!3.84e-37!180;CL:0000057!4.01e-26!75;CL:0000680!1.86e-14!57;CL:0000056!1.86e-14!57;CL:0000355!1.86e-14!57;CL:0000187!8.24e-14!54;CL:0002620!5.18e-12!23;CL:0000183!1.78e-11!59;CL:0000393!6.13e-11!60;CL:0000211!6.13e-11!60;CL:0000192!3.91e-10!42;CL:0000514!3.91e-10!42;CL:0000359!1.08e-07!32;CL:0002371!1.72e-07!591;CL:0002334!9.20e-07!12;CL:0000144!9.64e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.67e-12;23!CL:0000057;3.27e-11;73!CL:0000187;1.20e-08;55!CL:0000192;4.32e-08;43!CL:0002320;9.04e-08;188!CL:0000359;1.66e-07;32!CL:0000393;4.52e-07;61!CL:0000211;4.52e-07;61!CL:0002334;5.27e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.87e-28,76;CL:0000680,1.57e-15,58;CL:0000056,1.57e-15,58;CL:0000355,1.57e-15,58;CL:0000187,7.46e-15,55;CL:0002620,1.81e-12,23;CL:0000393,5.81e-12,61;CL:0000211,5.81e-12,61;CL:0000192,5.37e-11,43;CL:0000514,5.37e-11,43;CL:0000723,5.12e-08,433;CL:0000359,5.84e-08,32;CL:0000048,9.74e-08,427;CL:0002334,5.43e-07,12;CL:0000034,6.41e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000355;8.50e-09;58!CL:0000514;4.32e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.68e-18!83;UBERON:0002329!1.68e-18!83;UBERON:0003077!1.68e-18!83;UBERON:0003059!1.68e-18!83;UBERON:0007282!1.68e-18!83;UBERON:0009618!1.68e-18!83;UBERON:0007285!1.68e-18!83;UBERON:0003102!8.13e-17!95;UBERON:0004290!8.13e-16!70;UBERON:0000486!4.43e-15!82;UBERON:0000475!7.87e-14!365;UBERON:0001134!1.85e-13!61;UBERON:0002036!1.85e-13!61;UBERON:0003082!1.85e-13!61;UBERON:0002385!4.81e-13!63;UBERON:0001015!4.81e-13!63;UBERON:0000383!4.81e-13!63;UBERON:0002100!5.08e-11!216;UBERON:0002199!6.54e-11!45;UBERON:0002416!6.54e-11!45;UBERON:0002097!1.05e-09!40;UBERON:0000468!2.82e-09!659;UBERON:0005256!3.64e-09!143;UBERON:0000481!1.76e-08!347;UBERON:0003104!9.24e-08!238;UBERON:0009142!9.24e-08!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.53e-08;46!UBERON:0002416;1.53e-08;46!UBERON:0002097;1.69e-08;41!UBERON:0002384;3.88e-08;198!UBERON:0003102;1.72e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.36e-17,99;UBERON:0007524,1.25e-16,73;UBERON:0002329,1.56e-16,71;UBERON:0003059,1.56e-16,71;UBERON:0007282,1.56e-16,71;UBERON:0004290,1.56e-16,71;UBERON:0009618,1.56e-16,71;UBERON:0003077,2.90e-16,72;UBERON:0007285,2.90e-16,72;UBERON:0000486,1.19e-15,83;UBERON:0001134,4.50e-14,62;UBERON:0002036,4.50e-14,62;UBERON:0003082,4.50e-14,62;UBERON:0002385,2.19e-13,64;UBERON:0001015,2.19e-13,64;UBERON:0000383,2.19e-13,64;UBERON:0007503,1.38e-12,78;UBERON:0002199,3.62e-12,46;UBERON:0002416,3.62e-12,46;UBERON:0002097,6.71e-11,41;UBERON:0002100,2.88e-08,199;UBERON:0003104,6.14e-08,160;UBERON:0009142,6.14e-08,160;UBERON:0005256,7.43e-08,122 | |||
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| ||
|short_description=p1@ALDH1L2 | |short_description=p1@ALDH1L2 | ||
}} | }} |
Latest revision as of 01:08, 16 September 2015
Short description: | p1@ALDH1L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH1L2_5end |
Coexpression cluster: | C2179_Preadipocyte_myeloma_Fibroblast_Adipocyte_Multipotent_neurofibroma_Olfactory |
Association with transcript: | 0bp_to_ENST00000552270, ENST00000552427_5end |
EntrezGene: | ALDH1L2 |
HGNC: | 26777 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.87e-28 | 76 |
muscle precursor cell | 1.57e-15 | 58 |
myoblast | 1.57e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.57e-15 | 58 |
muscle cell | 7.46e-15 | 55 |
skin fibroblast | 1.81e-12 | 23 |
electrically responsive cell | 5.81e-12 | 61 |
electrically active cell | 5.81e-12 | 61 |
smooth muscle cell | 5.37e-11 | 43 |
smooth muscle myoblast | 5.37e-11 | 43 |
somatic stem cell | 5.12e-08 | 433 |
vascular associated smooth muscle cell | 5.84e-08 | 32 |
multi fate stem cell | 9.74e-08 | 427 |
preadipocyte | 5.43e-07 | 12 |
stem cell | 6.41e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.36e-17 | 99 |
dense mesenchyme tissue | 1.25e-16 | 73 |
somite | 1.56e-16 | 71 |
presomitic mesoderm | 1.56e-16 | 71 |
presumptive segmental plate | 1.56e-16 | 71 |
dermomyotome | 1.56e-16 | 71 |
trunk paraxial mesoderm | 1.56e-16 | 71 |
paraxial mesoderm | 2.90e-16 | 72 |
presumptive paraxial mesoderm | 2.90e-16 | 72 |
multilaminar epithelium | 1.19e-15 | 83 |
skeletal muscle tissue | 4.50e-14 | 62 |
striated muscle tissue | 4.50e-14 | 62 |
myotome | 4.50e-14 | 62 |
muscle tissue | 2.19e-13 | 64 |
musculature | 2.19e-13 | 64 |
musculature of body | 2.19e-13 | 64 |
epithelial vesicle | 1.38e-12 | 78 |
integument | 3.62e-12 | 46 |
integumental system | 3.62e-12 | 46 |
skin of body | 6.71e-11 | 41 |
trunk | 2.88e-08 | 199 |
mesenchyme | 6.14e-08 | 160 |
entire embryonic mesenchyme | 6.14e-08 | 160 |
trunk mesenchyme | 7.43e-08 | 122 |