FFCP PHASE1:Hg19::chr12:94551874..94551884,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10154 | |EntrezGene=10154 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9106 | |HGNC=9106 | ||
|TSSclassifier=strong | |||
|UniProt=F8VUW4 | |UniProt=F8VUW4 | ||
|association_with_transcript=0bp_to_ENST00000551850_5end | |association_with_transcript=0bp_to_ENST00000551850_5end | ||
|cluster_id=chr12:94551874..94551884,+ | |||
|coexpression_cluster_id=C138 | |||
|description=CAGE_peak_16_at_PLXNC1_5end | |description=CAGE_peak_16_at_PLXNC1_5end | ||
|id=chr12:94551874..94551884,+ | |id=chr12:94551874..94551884,+ | ||
|ontology_enrichment_celltype=CL:0000817!1.57e-22!3;CL:0000785!1.45e-15!2;CL:0000955!1.45e-15!2;CL:0000818!1.45e-15!2;CL:0000954!1.45e-15!2;CL:0000816!1.45e-15!2;CL:0000945!5.21e-14!24;CL:0000826!5.21e-14!24;CL:0000819!6.03e-09!1;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1;CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53 | |ontology_enrichment_celltype=CL:0000817!1.57e-22!3;CL:0000785!1.45e-15!2;CL:0000955!1.45e-15!2;CL:0000818!1.45e-15!2;CL:0000954!1.45e-15!2;CL:0000816!1.45e-15!2;CL:0000945!5.21e-14!24;CL:0000826!5.21e-14!24;CL:0000819!6.03e-09!1;CL:0000946!2.46e-08!1;CL:0000786!2.46e-08!1;CL:0000980!2.46e-08!1;CL:0000542!1.11e-07!53;CL:0000051!1.11e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000785;2.42e-50;1!CL:0000819;2.42e-50;1!CL:0000945;2.35e-09;24!CL:0000542;1.28e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.42e-50,1;CL:0000785,5.56e-26,2;CL:0000955,5.56e-26,2;CL:0000818,5.56e-26,2;CL:0000954,5.56e-26,2;CL:0000816,5.56e-26,2;CL:0000817,8.00e-18,3;CL:0000945,2.35e-09,24;CL:0000826,2.35e-09,24;CL:0000542,2.52e-09,53;CL:0000051,2.52e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000954;5.56e-26;2!CL:0000051;1.28e-08;53 | |||
|ontology_enrichment_disease=DOID:0060058!5.81e-12!10;DOID:0060073!6.03e-09!1;DOID:8675!6.03e-09!1;DOID:12603!6.50e-09!1 | |ontology_enrichment_disease=DOID:0060058!5.81e-12!10;DOID:0060073!6.03e-09!1;DOID:8675!6.03e-09!1;DOID:12603!6.50e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:0060073;2.42e-50;1!DOID:8675;2.42e-50;1!DOID:12603;5.12e-50;1!DOID:0060058;6.99e-21;10!DOID:2531;5.06e-07;51!DOID:0060083;5.06e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.42e-50,1;DOID:8675,2.42e-50,1;DOID:12603,3.99e-50,1;DOID:0060058,6.99e-21,10;DOID:2531,1.17e-09,51;DOID:0060083,1.17e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.58e-21!3;UBERON:0004854!1.58e-21!3;UBERON:0009034!1.58e-21!3;UBERON:0002095!1.58e-21!3;UBERON:0004782!1.58e-21!3;UBERON:0003281!1.58e-21!3;UBERON:0009664!1.58e-21!3;UBERON:0002296!1.58e-21!3;UBERON:0005602!1.58e-21!3;UBERON:0001179!1.58e-21!3;UBERON:0006293!1.58e-21!3;UBERON:0004177!1.50e-09!7;UBERON:0000029!9.46e-09!1;UBERON:0000998!1.10e-08!1;UBERON:0006868!1.10e-08!1;UBERON:0002372!1.84e-08!1;UBERON:0001961!1.84e-08!1;UBERON:0001744!1.84e-08!1;UBERON:0001735!1.84e-08!1;UBERON:0000945!2.03e-08!8;UBERON:0010039!2.03e-08!8 | |ontology_enrichment_uberon=UBERON:0002106!1.58e-21!3;UBERON:0004854!1.58e-21!3;UBERON:0009034!1.58e-21!3;UBERON:0002095!1.58e-21!3;UBERON:0004782!1.58e-21!3;UBERON:0003281!1.58e-21!3;UBERON:0009664!1.58e-21!3;UBERON:0002296!1.58e-21!3;UBERON:0005602!1.58e-21!3;UBERON:0001179!1.58e-21!3;UBERON:0006293!1.58e-21!3;UBERON:0004177!1.50e-09!7;UBERON:0000029!9.46e-09!1;UBERON:0000998!1.10e-08!1;UBERON:0006868!1.10e-08!1;UBERON:0002372!1.84e-08!1;UBERON:0001961!1.84e-08!1;UBERON:0001744!1.84e-08!1;UBERON:0001735!1.84e-08!1;UBERON:0000945!2.03e-08!8;UBERON:0010039!2.03e-08!8 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,6.19737604642413,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,1.85803175125719,0.432807638929335,0,0,0,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,5.83855325490131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,6.19737604642413,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,1.85803175125719,0.432807638929335,0,0,0,0,0,0,0,0.912938716132769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,5.83855325490131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.202056159043763,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p16@PLXNC1 | |short_description=p16@PLXNC1 | ||
}} | }} |
Latest revision as of 01:05, 16 September 2015
Short description: | p16@PLXNC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PLXNC1_5end |
Coexpression cluster: | C138_diffuse_Burkitt_lymphangiectasia_lymphoma_acute_CD19_pineal |
Association with transcript: | 0bp_to_ENST00000551850_5end |
EntrezGene: | PLXNC1 |
HGNC: | 9106 |
UniProt: | F8VUW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.42e-50 | 1 |
mature B cell | 5.56e-26 | 2 |
pre-B-II cell | 5.56e-26 | 2 |
transitional stage B cell | 5.56e-26 | 2 |
small pre-B-II cell | 5.56e-26 | 2 |
immature B cell | 5.56e-26 | 2 |
precursor B cell | 8.00e-18 | 3 |
lymphocyte of B lineage | 2.35e-09 | 24 |
pro-B cell | 2.35e-09 | 24 |
lymphocyte | 2.52e-09 | 53 |
common lymphoid progenitor | 2.52e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.42e-50 | 1 |
lymphosarcoma | 2.42e-50 | 1 |
acute leukemia | 3.99e-50 | 1 |
lymphoma | 6.99e-21 | 10 |
hematologic cancer | 1.17e-09 | 51 |
immune system cancer | 1.17e-09 | 51 |