FFCP PHASE1:Hg19::chr1:110993679..110993688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84432 | |EntrezGene=84432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18454 | |HGNC=18454 | ||
|TSSclassifier=strong | |||
|UniProt=P58294 | |UniProt=P58294 | ||
|association_with_transcript=-99bp_to_NM_032414,uc001dzs.2_5end | |association_with_transcript=-99bp_to_NM_032414,uc001dzs.2_5end | ||
|cluster_id=chr1:110993679..110993688,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_4_at_PROK1_5end | |description=CAGE_peak_4_at_PROK1_5end | ||
|id=chr1:110993679..110993688,+ | |id=chr1:110993679..110993688,+ | ||
|ontology_enrichment_celltype=CL:0002615!1.30e-28!3;CL:0002617!4.53e-19!2;CL:0000136!2.85e-15!15;CL:0002541!4.56e-13!3 | |ontology_enrichment_celltype=CL:0002615!1.30e-28!3;CL:0002617!4.53e-19!2;CL:0000136!2.85e-15!15;CL:0002541!4.56e-13!3 | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.12e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.18e-45;10!UBERON:0005564;4.18e-45;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.26e-14!6;UBERON:0002358!1.26e-14!6;UBERON:0003684!1.26e-14!6;UBERON:0001178!1.26e-14!6;UBERON:0000476!4.56e-13!3;UBERON:0000920!4.56e-13!3;UBERON:0001896!1.27e-12!3;UBERON:0005290!1.27e-12!3;UBERON:0010096!1.27e-12!3;UBERON:0003124!2.92e-12!7;UBERON:0002079!1.08e-10!1;UBERON:0001882!1.73e-10!1;UBERON:0005403!1.73e-10!1;UBERON:0001301!2.08e-10!1;UBERON:0006834!4.33e-10!1;UBERON:0007023!2.16e-09!115;UBERON:0003133!1.26e-08!48;UBERON:0003135!3.36e-08!11;UBERON:0004457!1.45e-07!12;UBERON:0000042!1.45e-07!12;UBERON:0002323!6.59e-07!46;UBERON:0005156!7.07e-07!59;UBERON:0000990!7.07e-07!59 | |ontology_enrichment_uberon=UBERON:0003688!1.26e-14!6;UBERON:0002358!1.26e-14!6;UBERON:0003684!1.26e-14!6;UBERON:0001178!1.26e-14!6;UBERON:0000476!4.56e-13!3;UBERON:0000920!4.56e-13!3;UBERON:0001896!1.27e-12!3;UBERON:0005290!1.27e-12!3;UBERON:0010096!1.27e-12!3;UBERON:0003124!2.92e-12!7;UBERON:0002079!1.08e-10!1;UBERON:0001882!1.73e-10!1;UBERON:0005403!1.73e-10!1;UBERON:0001301!2.08e-10!1;UBERON:0006834!4.33e-10!1;UBERON:0007023!2.16e-09!115;UBERON:0003133!1.26e-08!48;UBERON:0003135!3.36e-08!11;UBERON:0004457!1.45e-07!12;UBERON:0000042!1.45e-07!12;UBERON:0002323!6.59e-07!46;UBERON:0005156!7.07e-07!59;UBERON:0000990!7.07e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0000991;4.43e-22;21!UBERON:0003135;4.69e-19;11!UBERON:0002323;1.10e-12;45!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0002553;4.56e-10;52!UBERON:0003688;1.57e-09;6!UBERON:0002358;1.57e-09;6!UBERON:0003684;1.57e-09;6!UBERON:0001178;1.57e-09;6!UBERON:0003133;7.78e-08;44!UBERON:0004458;7.97e-08;48!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.81e-26,8;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003135,4.69e-19,11;UBERON:0002323,5.01e-18,46;UBERON:0004458,5.55e-17,49;UBERON:0003886,1.70e-15,54;UBERON:0002553,7.99e-14,61;UBERON:0003133,3.32e-10,48;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59 | |||
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|short_description=p4@PROK1 | |short_description=p4@PROK1 | ||
}} | }} |
Latest revision as of 00:52, 16 September 2015
Short description: | p4@PROK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PROK1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -99bp_to_NM_032414, uc001dzs.2_5end |
EntrezGene: | PROK1 |
HGNC: | 18454 |
UniProt: | P58294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 9.81e-26 | 8 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male reproductive organ | 4.69e-19 | 11 |
body cavity | 5.01e-18 | 46 |
body cavity or lining | 5.55e-17 | 49 |
body cavity precursor | 1.70e-15 | 54 |
anatomical cavity | 7.99e-14 | 61 |
reproductive organ | 3.32e-10 | 48 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |