FFCP PHASE1:Hg19::chr14:74959995..74960020,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14537 | |||
|TSSclassifier=strong | |||
|UniProt=E7EMS2 | |||
|association_with_transcript=0bp_to_ENST00000434013_5end | |||
|cluster_id=chr14:74959995..74960020,- | |||
|description=CAGE_peak_1_at_NPC2_5end | |||
|id=chr14:74959995..74960020,- | |||
|ontology_enrichment_celltype=CL:0002194!2.31e-24!63;CL:0000576!2.31e-24!63;CL:0000040!2.31e-24!63;CL:0000559!2.31e-24!63;CL:0002057!7.46e-24!42;CL:0000766!2.23e-23!76;CL:0002009!1.16e-22!65;CL:0000839!2.02e-21!70;CL:0000860!6.28e-21!45;CL:0000557!1.38e-20!71;CL:0000144!4.85e-19!625;CL:0000012!3.10e-17!682;CL:0000548!3.48e-17!679;CL:0000004!3.48e-17!679;CL:0000255!3.48e-17!679;CL:0000063!2.54e-15!578;CL:0002371!2.93e-15!591;CL:0000003!1.19e-09!722;CL:0000066!2.09e-09!254;CL:0000763!7.03e-07!112;CL:0000049!7.03e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.40e-18;39!CL:0000234;2.40e-18;39!CL:0000860;7.92e-18;33!CL:0002057;7.92e-18;33!CL:0000576;1.04e-14;48!CL:0000766;3.36e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.91e-28,48;CL:0000234,5.91e-28,48;CL:0002194,2.11e-27,59;CL:0000576,2.11e-27,59;CL:0000040,2.11e-27,59;CL:0000559,2.11e-27,59;CL:0000766,6.47e-26,72;CL:0002009,1.82e-25,61;CL:0000839,5.93e-24,66;CL:0000860,7.46e-24,42;CL:0002057,7.46e-24,42;CL:0000557,5.13e-23,67;CL:0000066,2.45e-09,253;CL:0000763,1.16e-07,108;CL:0000049,1.16e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.90e-22!448;UBERON:0004120!1.90e-22!448;UBERON:0006603!1.90e-22!448;UBERON:0002371!2.19e-20!80;UBERON:0003081!1.15e-18!216;UBERON:0001474!1.88e-18!86;UBERON:0002405!2.28e-18!115;UBERON:0004765!2.30e-16!101;UBERON:0001434!2.30e-16!101;UBERON:0002193!2.04e-15!112;UBERON:0002390!1.94e-13!102;UBERON:0003061!1.94e-13!102;UBERON:0002204!6.74e-13!167;UBERON:0000468!3.34e-11!659;UBERON:0000062!3.40e-10!511;UBERON:0000922!5.81e-10!612;UBERON:0000923!1.09e-09!604;UBERON:0005291!1.09e-09!604;UBERON:0006598!1.09e-09!604;UBERON:0002532!1.09e-09!604;UBERON:0002050!1.27e-09!605;UBERON:0005423!1.27e-09!605;UBERON:0000467!1.28e-09!625;UBERON:0000480!2.03e-09!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,9.06e-23,315;UBERON:0004120,9.06e-23,315;UBERON:0006603,9.06e-23,315;UBERON:0002371,1.38e-22,76;UBERON:0004765,5.46e-22,90;UBERON:0002405,5.68e-21,93;UBERON:0001474,2.18e-20,82;UBERON:0001434,1.31e-18,100;UBERON:0003081,1.60e-18,203;UBERON:0002193,8.06e-17,108;UBERON:0002390,8.52e-15,98;UBERON:0003061,8.52e-15,98;UBERON:0002204,1.61e-14,167;UBERON:0000922,1.09e-09,592;UBERON:0005423,2.46e-09,581;UBERON:0002050,5.41e-09,564;UBERON:0000923,1.83e-08,560;UBERON:0010316,1.83e-08,560;UBERON:0005291,1.83e-08,560;UBERON:0006598,1.83e-08,560;UBERON:0010317,1.83e-08,560;UBERON:0002532,1.83e-08,560 | |||
|phase1_expression=234.365109259018,281.113987868861,205.37056676783,218.159790409824,294.100400133155,384.701289128263,374.8838196891,209.099278104281,184.658239137286,148.17756371041,178.637099000941,393.41291120644,351.073848022072,148.643389905016,164.373098361046,186.234065567142,133.195490693299,133.646746540889,135.15738526497,186.897766160564,183.396621428583,133.845166071143,110.200855045457,70.900952187754,106.962328934772,25.2164238968239,20.1967450046867,21.4880432986344,354.421213440862,179.248328911398,308.858166015572,189.400772242659,207.229672119436,148.271358076882,43.923902729031,28.8603541949466,121.844182323962,248.743938430813,266.523570687818,216.57684897442,1725.94047544134,1389.1799335554,1658.52907999653,504.822685042649,520.335174459491,534.412686796759,620.817957575084,524.239057227828,642.02130686555,586.02940316022,624.775963224476,820.356855483502,627.781884621382,486.049966738621,667.652578910105,569.244834776837,547.449737016039,792.150282668923,629.920650499318,525.360817323565,595.222864118907,587.465165632541,637.685313416357,660.222138575143,653.551205391571,489.086063683762,570.505180079947,568.324480810753,555.900791035935,742.568660046794,567.259333967467,483.91681368766,744.635997648401,795.798663537085,856.370120259195,1001.12003230249,377.424200652224,415.539462492448,273.715674145127,1086.75359188538,704.761787316376,699.603708918548,95.0379720091143,110.866138086213,125.420804794761,134.42002010845,118.917608149696,101.731181871944,122.954346337984,100.175644226213,51.2291672198504,89.8472899737536,63.8396290969132,142.745034865348,107.617644092455,87.9702843148757,23.9985919538876,38.9080655121673,28.7842098599313,59.5183923590814,49.2142622616721,63.915453774189,46.7584148178987,33.9801893499779,34.4688911745559,36.3315587117139,22.4767206924963,66.0951209784484,55.1451633653884,31.2432018746985,32.0566020631584,30.1395209164455,34.5507692167601,40.9337466977261,24.0431704751447,37.618701775592,36.0227263985806,39.5171562305024,21.2536541296382,43.3248963480772,41.6693410468108,52.2748624446606,65.9519021560645,47.4830327382892,47.4736760898914,53.9852134660358,45.1620398306576,21.5719215250464,23.8021774247322,17.3789284659359,314.510857545011,379.616686592258,353.156395811831,66.8662431911448,96.7582167527267,122.540155040857,306.185089614673,232.124833134357,283.415381857875,326.385673064894,375.230204481034,122.53092512811,260.471131129168,215.425761257753,580.939834641883,537.364369305539,549.781166745507,928.920981669307,1131.40593352309,1325.73182224522,101.567590164386,153.12175792889,124.970580578734,180.898541415683,270.577136355389,104.544855937226,118.918135959445,566.707952858338,513.370717056923,305.934640066909,161.131726843659,84.3902037347549,195.493708096084,94.1217485685424,163.648673472115,156.542423681992,179.623498100936,151.462441250068,121.120143598048,74.9919871058822,115.966703907948,164.725521795079,248.179369054928,282.15285173622,91.9398110636339,162.340315953991,135.984228695176,345.351291381572,154.990083020682,134.001946434011,76.8592769253876,243.21420273932,204.465650257646,194.52221046863,281.971782870716,261.696992398086,255.82211046912,60.4549294131195,170.127241872525,86.1412450532118,155.576076454425,64.941277750002,61.51171885989,60.5342976886691,124.942352807995,165.33499110164,120.167883507415,128.304308586462,123.138930780721,142.89533382427,212.710969977607,114.300221374811,62.684378455854,72.0366700258876,76.3821060332658,89.4944363733137,133.261158250151,255.789573025847,53.278721799592,71.7552826430387,58.2812728188795,88.5268733448987,58.1216264904795,29.886302645293,78.7274302282625,58.2278346232369,44.8210223741514,31.8066555547584,63.2382803672596,105.878167216322,72.0669472808727,45.7414525953487,73.4197364704411,315.208451509337,204.832336563717,160.897378013231,161.127265797196,131.999649248199,154.654137959329,135.795982070135,165.270157323537,112.04804923628,68.837794225119,66.2538166338672,40.0591271922194,147.669001114169,328.455164159661,114.639289238609,104.859677228579,107.9729413878,123.308661514816,105.453650940725,92.2982708342166,150.471739906743,147.55854177426,138.893723657647,261.307030937125,159.875622135928,180.269416963153,285.196900087951,135.627887259359,134.647328684835,141.789577603537,23.8390073683911,172.921744591618,491.370208694977,187.453487477932,164.106559756125,238.354193587977,236.933831160677,57.9938783452378,138.311326442184,385.36468320748,298.173001595898,375.238186777686,192.873574208795,234.270669363765,199.00584323739,112.999228908176,139.933244421464,1512.26485138879,708.564914841612,1084.41296005856,428.363621319571,271.627101297556,202.171288667643,98.3352579277274,172.636559477293,282.169651865595,59.6122517854092,135.682636814381,154.874102308957,131.437397516269,211.961045722892,248.911745625303,242.944638655065,325.864503243931,302.798229460188,242.672882779843,401.558668337318,288.113044091623,162.702203385118,542.3343256286,138.902713344879,494.205769341984,185.9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| |||
|short_description=p1@NPC2 | |||
}} |
Latest revision as of 00:50, 16 September 2015
Short description: | p1@NPC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NPC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000434013_5end |
EntrezGene: | NPC2 |
HGNC: | 14537 |
UniProt: | E7EMS2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.91e-28 | 48 |
phagocyte | 5.91e-28 | 48 |
monopoietic cell | 2.11e-27 | 59 |
monocyte | 2.11e-27 | 59 |
monoblast | 2.11e-27 | 59 |
promonocyte | 2.11e-27 | 59 |
myeloid leukocyte | 6.47e-26 | 72 |
macrophage dendritic cell progenitor | 1.82e-25 | 61 |
myeloid lineage restricted progenitor cell | 5.93e-24 | 66 |
classical monocyte | 7.46e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.46e-24 | 42 |
granulocyte monocyte progenitor cell | 5.13e-23 | 67 |
epithelial cell | 2.45e-09 | 253 |
myeloid cell | 1.16e-07 | 108 |
common myeloid progenitor | 1.16e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 9.06e-23 | 315 |
mesoderm-derived structure | 9.06e-23 | 315 |
presumptive mesoderm | 9.06e-23 | 315 |
bone marrow | 1.38e-22 | 76 |
skeletal element | 5.46e-22 | 90 |
immune system | 5.68e-21 | 93 |
bone element | 2.18e-20 | 82 |
skeletal system | 1.31e-18 | 100 |
lateral plate mesoderm | 1.60e-18 | 203 |
hemolymphoid system | 8.06e-17 | 108 |
hematopoietic system | 8.52e-15 | 98 |
blood island | 8.52e-15 | 98 |
musculoskeletal system | 1.61e-14 | 167 |
embryo | 1.09e-09 | 592 |
developing anatomical structure | 2.46e-09 | 581 |
embryonic structure | 5.41e-09 | 564 |
germ layer | 1.83e-08 | 560 |
germ layer / neural crest | 1.83e-08 | 560 |
embryonic tissue | 1.83e-08 | 560 |
presumptive structure | 1.83e-08 | 560 |
germ layer / neural crest derived structure | 1.83e-08 | 560 |
epiblast (generic) | 1.83e-08 | 560 |