FFCP PHASE1:Hg19::chr2:102460683..102460713,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9448 | |EntrezGene=9448 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6866 | |HGNC=6866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_uc002tbk.2_5end | |association_with_transcript=120bp_to_uc002tbk.2_5end | ||
|cluster_id=chr2:102460683..102460713,+ | |||
|coexpression_cluster_id=C2653 | |||
|description=CAGE_peak_5_at_MAP4K4_5end | |description=CAGE_peak_5_at_MAP4K4_5end | ||
|id=chr2:102460683..102460713,+ | |id=chr2:102460683..102460713,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.54e-09!42;CL:0000860!2.25e-07!45 | |ontology_enrichment_celltype=CL:0002057!6.54e-09!42;CL:0000860!2.25e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-13;33!CL:0002057;3.68e-13;33!CL:0000473;6.92e-09;39!CL:0000234;6.92e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.07e-10,42;CL:0002057,3.07e-10,42;CL:0000473,1.26e-08,48;CL:0000234,1.26e-08,48 | |||
|ontology_enrichment_development_v019=CL:0002057;3.24e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.75e-09!82;UBERON:0002020!4.74e-09!34;UBERON:0003528!4.74e-09!34;UBERON:0001893!1.16e-08!34;UBERON:0002791!1.65e-08!33;UBERON:0000073!2.22e-08!94;UBERON:0001016!2.22e-08!94;UBERON:0005743!3.11e-08!86;UBERON:0001049!4.84e-08!57;UBERON:0005068!4.84e-08!57;UBERON:0006241!4.84e-08!57;UBERON:0007135!4.84e-08!57;UBERON:0002780!5.71e-08!41;UBERON:0001890!5.71e-08!41;UBERON:0006240!5.71e-08!41;UBERON:0001869!9.10e-08!32;UBERON:0003080!2.77e-07!42;UBERON:0000955!3.90e-07!69;UBERON:0006238!3.90e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.76e-08;34!UBERON:0002020;1.76e-08;34!UBERON:0001893;2.78e-08;34!UBERON:0002791;2.96e-08;32!UBERON:0001869;8.38e-08;32!UBERON:0002780;5.17e-07;41!UBERON:0001890;5.17e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.71e-11,81;UBERON:0001016,1.87e-10,89;UBERON:0003528,2.19e-10,34;UBERON:0002020,2.19e-10,34;UBERON:0001049,2.53e-10,56;UBERON:0005068,2.53e-10,56;UBERON:0006241,2.53e-10,56;UBERON:0007135,2.53e-10,56;UBERON:0001893,6.11e-10,34;UBERON:0002791,2.56e-09,32;UBERON:0002780,4.90e-09,41;UBERON:0001890,4.90e-09,41;UBERON:0003080,4.90e-09,41;UBERON:0006240,4.90e-09,41;UBERON:0000073,5.25e-09,53;UBERON:0002616,5.25e-09,53;UBERON:0001869,6.38e-09,32;UBERON:0000955,7.60e-09,68;UBERON:0006238,7.60e-09,68;UBERON:0003075,1.81e-07,82;UBERON:0007284,1.81e-07,82;UBERON:0002346,5.41e-07,86;UBERON:0010371,5.82e-07,104;UBERON:0000956,7.01e-07,25;UBERON:0000203,7.01e-07,25;UBERON:0002619,9.08e-07,22 | |||
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| ||
|short_description=p5@MAP4K4 | |short_description=p5@MAP4K4 | ||
}} | }} |
Latest revision as of 00:43, 16 September 2015
Short description: | p5@MAP4K4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAP4K4_5end |
Coexpression cluster: | C2653_CD14_Cardiac_hepatoblastoma_mesenchymal_Neutrophils_migratory_leiomyoma |
Association with transcript: | 120bp_to_uc002tbk.2_5end |
EntrezGene: | MAP4K4 |
HGNC: | 6866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.07e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.07e-10 | 42 |
defensive cell | 1.26e-08 | 48 |
phagocyte | 1.26e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.71e-11 | 81 |
nervous system | 1.87e-10 | 89 |
brain grey matter | 2.19e-10 | 34 |
gray matter | 2.19e-10 | 34 |
neural tube | 2.53e-10 | 56 |
neural rod | 2.53e-10 | 56 |
future spinal cord | 2.53e-10 | 56 |
neural keel | 2.53e-10 | 56 |
telencephalon | 6.11e-10 | 34 |
regional part of telencephalon | 2.56e-09 | 32 |
regional part of forebrain | 4.90e-09 | 41 |
forebrain | 4.90e-09 | 41 |
anterior neural tube | 4.90e-09 | 41 |
future forebrain | 4.90e-09 | 41 |
regional part of nervous system | 5.25e-09 | 53 |
regional part of brain | 5.25e-09 | 53 |
cerebral hemisphere | 6.38e-09 | 32 |
brain | 7.60e-09 | 68 |
future brain | 7.60e-09 | 68 |
neural plate | 1.81e-07 | 82 |
presumptive neural plate | 1.81e-07 | 82 |
neurectoderm | 5.41e-07 | 86 |
ecto-epithelium | 5.82e-07 | 104 |
cerebral cortex | 7.01e-07 | 25 |
pallium | 7.01e-07 | 25 |
regional part of cerebral cortex | 9.08e-07 | 22 |