FFCP PHASE1:Hg19::chr4:148538517..148538592,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55751 | |EntrezGene=55751 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25587 | |HGNC=25587 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NVA4 | |UniProt=Q9NVA4 | ||
|association_with_transcript=0bp_to_ENST00000296582,ENST00000508208,NM_018241,uc003ila.3_5end | |association_with_transcript=0bp_to_ENST00000296582,ENST00000508208,NM_018241,uc003ila.3_5end | ||
|cluster_id=chr4:148538517..148538592,+ | |||
|description=CAGE_peak_1_at_TMEM184C_5end | |description=CAGE_peak_1_at_TMEM184C_5end | ||
|id=chr4:148538517..148538592,+ | |id=chr4:148538517..148538592,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.92e-13!115;UBERON:0004121!1.36e-11!169;UBERON:0000073!9.95e-11!94;UBERON:0001016!9.95e-11!94;UBERON:0000924!1.35e-10!173;UBERON:0006601!1.35e-10!173;UBERON:0000153!2.29e-10!129;UBERON:0007811!2.29e-10!129;UBERON:0001017!2.59e-10!82;UBERON:0000033!2.80e-10!123;UBERON:0005743!3.68e-10!86;UBERON:0000468!3.80e-10!659;UBERON:0000062!4.55e-10!511;UBERON:0001049!1.15e-09!57;UBERON:0005068!1.15e-09!57;UBERON:0006241!1.15e-09!57;UBERON:0007135!1.15e-09!57;UBERON:0002616!1.89e-09!59;UBERON:0000955!1.36e-08!69;UBERON:0006238!1.36e-08!69;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0003080!1.60e-08!42;UBERON:0000467!5.28e-08!625;UBERON:0000480!6.40e-08!626;UBERON:0001893!6.75e-08!34;UBERON:0002020!8.13e-08!34;UBERON:0003528!8.13e-08!34;UBERON:0002791!1.46e-07!33;UBERON:0003075!1.66e-07!86;UBERON:0007284!1.66e-07!86;UBERON:0000922!4.04e-07!612;UBERON:0001869!4.86e-07!32 | |ontology_enrichment_uberon=UBERON:0007023!1.92e-13!115;UBERON:0004121!1.36e-11!169;UBERON:0000073!9.95e-11!94;UBERON:0001016!9.95e-11!94;UBERON:0000924!1.35e-10!173;UBERON:0006601!1.35e-10!173;UBERON:0000153!2.29e-10!129;UBERON:0007811!2.29e-10!129;UBERON:0001017!2.59e-10!82;UBERON:0000033!2.80e-10!123;UBERON:0005743!3.68e-10!86;UBERON:0000468!3.80e-10!659;UBERON:0000062!4.55e-10!511;UBERON:0001049!1.15e-09!57;UBERON:0005068!1.15e-09!57;UBERON:0006241!1.15e-09!57;UBERON:0007135!1.15e-09!57;UBERON:0002616!1.89e-09!59;UBERON:0000955!1.36e-08!69;UBERON:0006238!1.36e-08!69;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0003080!1.60e-08!42;UBERON:0000467!5.28e-08!625;UBERON:0000480!6.40e-08!626;UBERON:0001893!6.75e-08!34;UBERON:0002020!8.13e-08!34;UBERON:0003528!8.13e-08!34;UBERON:0002791!1.46e-07!33;UBERON:0003075!1.66e-07!86;UBERON:0007284!1.66e-07!86;UBERON:0000922!4.04e-07!612;UBERON:0001869!4.86e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.42e-07;41!UBERON:0001890;3.42e-07;41!UBERON:0001893;6.94e-07;34!UBERON:0002791;9.10e-07;32!UBERON:0001869;9.63e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.16e-13,114;UBERON:0004121,1.88e-11,171;UBERON:0000924,1.88e-11,171;UBERON:0006601,1.88e-11,171;UBERON:0011216,5.03e-11,223;UBERON:0001016,7.07e-11,89;UBERON:0001017,2.50e-10,81;UBERON:0001049,1.05e-09,56;UBERON:0005068,1.05e-09,56;UBERON:0006241,1.05e-09,56;UBERON:0007135,1.05e-09,56;UBERON:0000073,4.91e-09,53;UBERON:0002616,4.91e-09,53;UBERON:0000955,1.32e-08,68;UBERON:0006238,1.32e-08,68;UBERON:0002780,1.40e-08,41;UBERON:0001890,1.40e-08,41;UBERON:0003080,1.40e-08,41;UBERON:0006240,1.40e-08,41;UBERON:0003075,5.11e-08,82;UBERON:0007284,5.11e-08,82;UBERON:0001893,6.75e-08,34;UBERON:0003528,8.13e-08,34;UBERON:0002020,8.13e-08,34;UBERON:0002791,3.41e-07,32;UBERON:0010371,3.81e-07,104;UBERON:0001869,4.86e-07,32;UBERON:0002346,7.03e-07,86 | |||
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8.97591778449052 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|short_description=p1@TMEM184C | |short_description=p1@TMEM184C | ||
}} | }} |
Latest revision as of 00:08, 16 September 2015
Short description: | p1@TMEM184C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM184C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296582, ENST00000508208, NM_018241, uc003ila.3_5end |
EntrezGene: | TMEM184C |
HGNC: | 25587 |
UniProt: | Q9NVA4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.16e-13 | 114 |
ectoderm-derived structure | 1.88e-11 | 171 |
ectoderm | 1.88e-11 | 171 |
presumptive ectoderm | 1.88e-11 | 171 |
organ system subdivision | 5.03e-11 | 223 |
nervous system | 7.07e-11 | 89 |
central nervous system | 2.50e-10 | 81 |
neural tube | 1.05e-09 | 56 |
neural rod | 1.05e-09 | 56 |
future spinal cord | 1.05e-09 | 56 |
neural keel | 1.05e-09 | 56 |
regional part of nervous system | 4.91e-09 | 53 |
regional part of brain | 4.91e-09 | 53 |
brain | 1.32e-08 | 68 |
future brain | 1.32e-08 | 68 |
regional part of forebrain | 1.40e-08 | 41 |
forebrain | 1.40e-08 | 41 |
anterior neural tube | 1.40e-08 | 41 |
future forebrain | 1.40e-08 | 41 |
neural plate | 5.11e-08 | 82 |
presumptive neural plate | 5.11e-08 | 82 |
telencephalon | 6.75e-08 | 34 |
brain grey matter | 8.13e-08 | 34 |
gray matter | 8.13e-08 | 34 |
regional part of telencephalon | 3.41e-07 | 32 |
ecto-epithelium | 3.81e-07 | 104 |
cerebral hemisphere | 4.86e-07 | 32 |
neurectoderm | 7.03e-07 | 86 |