FFCP PHASE1:Hg19::chr16:28518153..28518187,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:28518153..28518187,- to FFCP PHASE1:Hg19::chr16:28518153..28518187,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=246778 | |EntrezGene=246778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19157 | |HGNC=19157 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEV9 | |UniProt=Q8NEV9 | ||
|association_with_transcript=0bp_to_ENST00000356897,NM_145659,uc002dqc.2_5end | |||
|cluster_id=chr16:28518153..28518187,- | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_1_at_IL27_5end | |||
|id=chr16:28518153..28518187,- | |||
|ontology_enrichment_celltype=CL:0002057!6.24e-65!42;CL:0000860!8.86e-60!45;CL:0002194!1.37e-45!63;CL:0000576!1.37e-45!63;CL:0000040!1.37e-45!63;CL:0000559!1.37e-45!63;CL:0002009!8.14e-44!65;CL:0000766!4.36e-42!76;CL:0002087!8.00e-42!119;CL:0000839!7.96e-40!70;CL:0000738!2.08e-39!140;CL:0000557!4.28e-39!71;CL:0002031!2.67e-34!124;CL:0000037!6.37e-29!172;CL:0000566!6.37e-29!172;CL:0000988!2.06e-26!182;CL:0002032!1.43e-25!165;CL:0000837!1.43e-25!165;CL:0000763!1.93e-24!112;CL:0000049!1.93e-24!112;CL:0002393!3.64e-14!9;CL:0002397!3.64e-14!9;CL:0000842!2.75e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-75;33!CL:0002057;3.81e-75;33!CL:0000473;1.84e-53;39!CL:0000234;1.84e-53;39!CL:0000576;1.90e-44;48!CL:0000766;1.51e-28;69!CL:0002087;3.02e-17;104!CL:0000763;2.59e-14;100!CL:0002393;2.56e-09;6!CL:0002397;2.56e-09;6!CL:0000738;2.47e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.33e-84,42;CL:0002057,3.33e-84,42;CL:0000473,4.61e-73,48;CL:0000234,4.61e-73,48;CL:0002194,1.86e-57,59;CL:0000576,1.86e-57,59;CL:0000040,1.86e-57,59;CL:0000559,1.86e-57,59;CL:0002009,1.92e-55,61;CL:0000839,6.22e-51,66;CL:0000766,3.11e-50,72;CL:0000557,4.14e-50,67;CL:0002087,4.53e-35,115;CL:0000763,6.16e-32,108;CL:0000049,6.16e-32,108;CL:0000738,3.55e-31,136;CL:0002031,7.74e-31,120;CL:0000037,3.19e-24,168;CL:0002032,1.54e-23,161;CL:0000837,1.54e-23,161;CL:0000988,1.02e-22,177;CL:0000134,1.93e-09,354;CL:0002320,3.82e-09,361;CL:0000219,4.23e-08,386;CL:0000048,1.38e-07,427;CL:0000723,2.14e-07,433;CL:0000034,3.75e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.63e-60;42!CL:0000049;1.23e-10;108!UBERON:0010115;5.34e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.27e-07;1!DOID:0050177;1.27e-07;1!DOID:0050427;1.27e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.27e-07,1;DOID:0050177,1.27e-07,1;DOID:0050427,1.27e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.62e-40!102;UBERON:0003061!2.62e-40!102;UBERON:0002193!2.17e-35!112;UBERON:0002371!2.43e-33!80;UBERON:0001474!3.56e-30!86;UBERON:0002405!3.47e-26!115;UBERON:0004765!6.32e-24!101;UBERON:0001434!6.32e-24!101;UBERON:0003081!6.71e-14!216;UBERON:0002204!2.70e-12!167;UBERON:0007023!1.19e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;5.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.15e-43,76;UBERON:0001474,3.81e-40,82;UBERON:0002390,8.87e-39,98;UBERON:0003061,8.87e-39,98;UBERON:0004765,3.58e-36,90;UBERON:0002405,7.41e-35,93;UBERON:0002193,9.81e-35,108;UBERON:0001434,4.33e-32,100;UBERON:0002204,6.69e-19,167;UBERON:0003081,1.57e-17,203;UBERON:0000926,2.76e-10,315;UBERON:0004120,2.76e-10,315;UBERON:0006603,2.76e-10,315;UBERON:0002384,9.69e-09,371;UBERON:0002363,7.40e-07,1;UBERON:0007645,7.40e-07,1;UBERON:0007647,7.40e-07,1;UBERON:0010115,7.40e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,2.4065333696417,2.60413044859022,0.447830948479849,0,0.515151135268373,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,6.32923263108731,4.09857130446561,3.78371567821736,11.0318617835718,3.22742341791913,2.70852973188684,0.752969358170419,0,0.898893937780338,10.4068523406107,2.56743221660875,5.75403413219137,10.2253903057882,6.18337338627059,2.98357325372886,5.5139755339431,1.70215567407342,1.24564449799115,4.52247597462138,2.60741459210101,3.04064382587163,21.7943820948013,1.47311054395026,5.37986058649504,0.422510572623884,0.850417199860174,1.25795187305026,1.68492946719743,0.450530678524519,0.964353520182481,0.285012743741249,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0.213233981900981,0,0.258355639344024,0.186224142887574,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,7.37307532297436 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,0.786728553697808,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0.553995408531877,2.4065333696417,2.60413044859022,0.447830948479849,0,0.515151135268373,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,6.32923263108731,4.09857130446561,3.78371567821736,11.0318617835718,3.22742341791913,2.70852973188684,0.752969358170419,0,0.898893937780338,10.4068523406107,2.56743221660875,5.75403413219137,10.2253903057882,6.18337338627059,2.98357325372886,5.5139755339431,1.70215567407342,1.24564449799115,4.52247597462138,2.60741459210101,3.04064382587163,21.7943820948013,1.47311054395026,5.37986058649504,0.422510572623884,0.850417199860174,1.25795187305026,1.68492946719743,0.450530678524519,0.964353520182481,0.285012743741249,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.469919589899268,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.310298987585686,0.213233981900981,0,0.258355639344024,0.186224142887574,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,7.37307532297436 | ||
|short_description=p1@IL27 | |||
}} | }} |
Latest revision as of 00:05, 16 September 2015
Short description: | p1@IL27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL27_5end |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | 0bp_to_ENST00000356897, NM_145659, uc002dqc.2_5end |
EntrezGene: | IL27 |
HGNC: | 19157 |
UniProt: | Q8NEV9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.33e-84 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.33e-84 | 42 |
defensive cell | 4.61e-73 | 48 |
phagocyte | 4.61e-73 | 48 |
monopoietic cell | 1.86e-57 | 59 |
monocyte | 1.86e-57 | 59 |
monoblast | 1.86e-57 | 59 |
promonocyte | 1.86e-57 | 59 |
macrophage dendritic cell progenitor | 1.92e-55 | 61 |
myeloid lineage restricted progenitor cell | 6.22e-51 | 66 |
myeloid leukocyte | 3.11e-50 | 72 |
granulocyte monocyte progenitor cell | 4.14e-50 | 67 |
nongranular leukocyte | 4.53e-35 | 115 |
myeloid cell | 6.16e-32 | 108 |
common myeloid progenitor | 6.16e-32 | 108 |
leukocyte | 3.55e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 7.74e-31 | 120 |
hematopoietic stem cell | 3.19e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.54e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-23 | 161 |
hematopoietic cell | 1.02e-22 | 177 |
mesenchymal cell | 1.93e-09 | 354 |
connective tissue cell | 3.82e-09 | 361 |
motile cell | 4.23e-08 | 386 |
multi fate stem cell | 1.38e-07 | 427 |
somatic stem cell | 2.14e-07 | 433 |
stem cell | 3.75e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.15e-43 | 76 |
bone element | 3.81e-40 | 82 |
hematopoietic system | 8.87e-39 | 98 |
blood island | 8.87e-39 | 98 |
skeletal element | 3.58e-36 | 90 |
immune system | 7.41e-35 | 93 |
hemolymphoid system | 9.81e-35 | 108 |
skeletal system | 4.33e-32 | 100 |
musculoskeletal system | 6.69e-19 | 167 |
lateral plate mesoderm | 1.57e-17 | 203 |
mesoderm | 2.76e-10 | 315 |
mesoderm-derived structure | 2.76e-10 | 315 |
presumptive mesoderm | 2.76e-10 | 315 |
connective tissue | 9.69e-09 | 371 |
dura mater | 7.40e-07 | 1 |
future meninx | 7.40e-07 | 1 |
ectomeninx | 7.40e-07 | 1 |
future dura mater | 7.40e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.27e-07 | 1 |
monogenic disease | 1.27e-07 | 1 |
xeroderma pigmentosum | 1.27e-07 | 1 |