FFCP PHASE1:Hg19::chr5:147691979..147691997,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84651 | |EntrezGene=84651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24643 | |HGNC=24643 | ||
|TSSclassifier=strong | |||
|UniProt=P58062 | |UniProt=P58062 | ||
|association_with_transcript=0bp_to_ENST00000274565,ENST00000504037,ENST00000514394,ENST00000514646,NM_032566,uc003lpd.2_5end | |association_with_transcript=0bp_to_ENST00000274565,ENST00000504037,ENST00000514394,ENST00000514646,NM_032566,uc003lpd.2_5end | ||
|cluster_id=chr5:147691979..147691997,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_SPINK7_5end | |description=CAGE_peak_1_at_SPINK7_5end | ||
|id=chr5:147691979..147691997,+ | |id=chr5:147691979..147691997,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.94e-18!45;CL:0002057!1.12e-16!42;CL:0002076!3.88e-15!43;CL:0002368!6.11e-11!13;CL:0002194!7.75e-11!63;CL:0000576!7.75e-11!63;CL:0000040!7.75e-11!63;CL:0000559!7.75e-11!63;CL:0000223!1.87e-10!59;CL:0002009!2.58e-10!65;CL:0000839!4.43e-10!70;CL:0000557!6.15e-09!71;CL:0000244!1.55e-08!4;CL:0000731!1.55e-08!4;CL:0000766!5.75e-08!76;CL:0002251!7.92e-08!21;CL:0002623!1.65e-07!3;CL:0002621!6.58e-07!3;CL:0002328!7.41e-07!3 | |ontology_enrichment_celltype=CL:0000860!2.94e-18!45;CL:0002057!1.12e-16!42;CL:0002076!3.88e-15!43;CL:0002368!6.11e-11!13;CL:0002194!7.75e-11!63;CL:0000576!7.75e-11!63;CL:0000040!7.75e-11!63;CL:0000559!7.75e-11!63;CL:0000223!1.87e-10!59;CL:0002009!2.58e-10!65;CL:0000839!4.43e-10!70;CL:0000557!6.15e-09!71;CL:0000244!1.55e-08!4;CL:0000731!1.55e-08!4;CL:0000766!5.75e-08!76;CL:0002251!7.92e-08!21;CL:0002623!1.65e-07!3;CL:0002621!6.58e-07!3;CL:0002328!7.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.05e-20;33!CL:0002057;2.05e-20;33!CL:0002076;2.61e-14;42!CL:0000244;8.50e-14;4!CL:0000731;8.50e-14;4!CL:0000473;1.34e-13;39!CL:0000234;1.34e-13;39!CL:0002368;5.14e-12;13!CL:0002623;6.55e-12;3!CL:0002621;5.82e-11;3!CL:0002328;8.78e-11;3!CL:0002251;4.01e-10;20!CL:0002202;2.01e-09;9!CL:0002632;2.01e-09;9!CL:0000576;4.80e-09;48!CL:0000575;1.38e-08;2!CL:0000622;2.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.17e-17,42;CL:0000860,1.52e-16,42;CL:0002057,1.52e-16,42;CL:0000473,5.25e-14,48;CL:0000234,5.25e-14,48;CL:0000244,1.08e-13,4;CL:0000731,1.08e-13,4;CL:0002368,5.61e-12,13;CL:0002623,6.55e-12,3;CL:0000223,1.56e-11,58;CL:0002621,7.16e-11,3;CL:0002328,8.79e-11,3;CL:0002194,1.80e-10,59;CL:0000576,1.80e-10,59;CL:0000040,1.80e-10,59;CL:0000559,1.80e-10,59;CL:0002251,4.48e-10,20;CL:0002009,5.12e-10,61;CL:0002202,2.05e-09,9;CL:0002632,2.05e-09,9;CL:0000839,5.26e-09,66;CL:0000557,8.03e-09,67;CL:0000575,1.38e-08,2;CL:0000766,5.58e-08,72;CL:0000622,2.73e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-12;42!CL:0000223;3.82e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!7.50e-15!72;UBERON:0004119!1.39e-12!169;UBERON:0000925!1.39e-12!169;UBERON:0006595!1.39e-12!169;UBERON:0000065!1.66e-10!53;UBERON:0000166!5.96e-10!21;UBERON:0001007!1.66e-08!155;UBERON:0001555!1.66e-08!155;UBERON:0007026!1.66e-08!155;UBERON:0000165!3.63e-08!28;UBERON:0000930!3.63e-08!28;UBERON:0000161!4.51e-08!35;UBERON:0000072!5.88e-08!46;UBERON:0002371!2.77e-07!80;UBERON:0001041!3.43e-07!98;UBERON:0003408!5.68e-07!10;UBERON:0001949!6.58e-07!3;UBERON:0004815!7.41e-07!3;UBERON:0002031!7.41e-07!3;UBERON:0000062!7.43e-07!511;UBERON:0000365!8.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;5.11e-13;12!UBERON:0000365;4.69e-11;5!UBERON:0000165;5.24e-11;28!UBERON:0001949;5.82e-11;3!UBERON:0004815;8.78e-11;3!UBERON:0002031;8.78e-11;3!UBERON:0005910;3.19e-09;6!UBERON:0001041;7.93e-09;14!UBERON:0000161;2.27e-08;19!UBERON:0000166;2.27e-08;19!UBERON:0007196;7.97e-08;15!UBERON:0001558;7.97e-08;15!UBERON:0002370;2.43e-07;2!UBERON:0005058;2.43e-07;2!UBERON:0009113;2.43e-07;2!UBERON:0000153;8.77e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.07e-12,74;UBERON:0000166,7.61e-12,22;UBERON:0000365,5.66e-11,5;UBERON:0000153,6.48e-11,62;UBERON:0007811,6.48e-11,62;UBERON:0001949,7.16e-11,3;UBERON:0004815,8.79e-11,3;UBERON:0002031,8.79e-11,3;UBERON:0000165,1.63e-10,29;UBERON:0000930,1.63e-10,29;UBERON:0004119,5.55e-10,160;UBERON:0000925,5.55e-10,160;UBERON:0006595,5.55e-10,160;UBERON:0005910,3.72e-09,6;UBERON:0001042,7.43e-09,10;UBERON:0009145,7.43e-09,10;UBERON:0003408,1.09e-08,10;UBERON:0002405,2.79e-08,93;UBERON:0000161,3.53e-08,36;UBERON:0001444,4.57e-08,49;UBERON:0000065,4.67e-08,54;UBERON:0006562,5.13e-08,11;UBERON:0000033,5.62e-08,56;UBERON:0007196,8.08e-08,15;UBERON:0001558,8.08e-08,15;UBERON:0001041,9.36e-08,87;UBERON:0002371,2.18e-07,76;UBERON:0000072,7.66e-07,47 | |||
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| ||
|short_description=p1@SPINK7 | |short_description=p1@SPINK7 | ||
}} | }} |
Latest revision as of 23:59, 15 September 2015
Short description: | p1@SPINK7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINK7_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000274565, ENST00000504037, ENST00000514394, ENST00000514646, NM_032566, uc003lpd.2_5end |
EntrezGene: | SPINK7 |
HGNC: | 24643 |
UniProt: | P58062 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.17e-17 | 42 |
classical monocyte | 1.52e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.52e-16 | 42 |
defensive cell | 5.25e-14 | 48 |
phagocyte | 5.25e-14 | 48 |
transitional epithelial cell | 1.08e-13 | 4 |
urothelial cell | 1.08e-13 | 4 |
respiratory epithelial cell | 5.61e-12 | 13 |
acinar cell of salivary gland | 6.55e-12 | 3 |
endodermal cell | 1.56e-11 | 58 |
gingival epithelial cell | 7.16e-11 | 3 |
bronchial epithelial cell | 8.79e-11 | 3 |
monopoietic cell | 1.80e-10 | 59 |
monocyte | 1.80e-10 | 59 |
monoblast | 1.80e-10 | 59 |
promonocyte | 1.80e-10 | 59 |
epithelial cell of alimentary canal | 4.48e-10 | 20 |
macrophage dendritic cell progenitor | 5.12e-10 | 61 |
epithelial cell of tracheobronchial tree | 2.05e-09 | 9 |
epithelial cell of lower respiratory tract | 2.05e-09 | 9 |
myeloid lineage restricted progenitor cell | 5.26e-09 | 66 |
granulocyte monocyte progenitor cell | 8.03e-09 | 67 |
corneal epithelial cell | 1.38e-08 | 2 |
myeloid leukocyte | 5.58e-08 | 72 |
acinar cell | 2.73e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.07e-12 | 74 |
oral opening | 7.61e-12 | 22 |
urothelium | 5.66e-11 | 5 |
anterior region of body | 6.48e-11 | 62 |
craniocervical region | 6.48e-11 | 62 |
gingival epithelium | 7.16e-11 | 3 |
lower respiratory tract epithelium | 8.79e-11 | 3 |
epithelium of bronchus | 8.79e-11 | 3 |
mouth | 1.63e-10 | 29 |
stomodeum | 1.63e-10 | 29 |
endoderm-derived structure | 5.55e-10 | 160 |
endoderm | 5.55e-10 | 160 |
presumptive endoderm | 5.55e-10 | 160 |
transitional epithelium | 3.72e-09 | 6 |
chordate pharynx | 7.43e-09 | 10 |
pharyngeal region of foregut | 7.43e-09 | 10 |
gland of gut | 1.09e-08 | 10 |
immune system | 2.79e-08 | 93 |
orifice | 3.53e-08 | 36 |
subdivision of head | 4.57e-08 | 49 |
respiratory tract | 4.67e-08 | 54 |
pharynx | 5.13e-08 | 11 |
head | 5.62e-08 | 56 |
tracheobronchial tree | 8.08e-08 | 15 |
lower respiratory tract | 8.08e-08 | 15 |
foregut | 9.36e-08 | 87 |
bone marrow | 2.18e-07 | 76 |
segment of respiratory tract | 7.66e-07 | 47 |