FFCP PHASE1:Hg19::chr11:118213360..118213405,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:118213360..118213405,-
|short_description=p1@CD3D
|description=CAGE_peak_1_at_CD3D_5end
|association_with_transcript=0bp_to_ENST00000529594_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=915 | |EntrezGene=915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1673 | |HGNC=1673 | ||
|TSSclassifier=strong | |||
|UniProt=E9PMT5 | |UniProt=E9PMT5 | ||
|association_with_transcript=0bp_to_ENST00000529594_5end | |||
|cluster_id=chr11:118213360..118213405,- | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_CD3D_5end | |||
|id=chr11:118213360..118213405,- | |||
|ontology_enrichment_celltype=CL:0000037!3.20e-32!172;CL:0000566!3.20e-32!172;CL:0000738!5.24e-32!140;CL:0002032!1.17e-29!165;CL:0000837!1.17e-29!165;CL:0000988!1.83e-28!182;CL:0002087!2.12e-26!119;CL:0002031!3.33e-23!124;CL:0000084!9.01e-22!25;CL:0000827!9.01e-22!25;CL:0000791!3.68e-18!18;CL:0000789!3.68e-18!18;CL:0002420!3.68e-18!18;CL:0002419!3.68e-18!18;CL:0000790!3.68e-18!18;CL:0000763!3.53e-15!112;CL:0000049!3.53e-15!112;CL:0000838!5.84e-15!52;CL:0000542!1.96e-14!53;CL:0000051!1.96e-14!53;CL:0000766!2.75e-13!76;CL:0000625!1.79e-12!11;CL:0002057!3.16e-11!42;CL:0002194!1.53e-10!63;CL:0000576!1.53e-10!63;CL:0000040!1.53e-10!63;CL:0000559!1.53e-10!63;CL:0002009!1.79e-10!65;CL:0000860!7.53e-10!45;CL:0000557!1.05e-09!71;CL:0000839!1.94e-09!70;CL:0000624!2.65e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.10e-29;25!CL:0000791;1.22e-25;18!CL:0000789;1.22e-25;18!CL:0002419;1.22e-25;18!CL:0000625;1.37e-18;11!CL:0000624;1.57e-10;6!CL:0000542;2.61e-10;53!CL:0000094;6.45e-08;8!CL:0002087;1.69e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.09e-29,25;CL:0000827,1.09e-29,25;CL:0000791,1.23e-25,18;CL:0000789,1.23e-25,18;CL:0002420,1.23e-25,18;CL:0002419,1.23e-25,18;CL:0000790,1.23e-25,18;CL:0000037,1.22e-23,168;CL:0000738,1.82e-22,136;CL:0000988,1.93e-21,177;CL:0002032,3.81e-21,161;CL:0000837,3.81e-21,161;CL:0000625,1.38e-18,11;CL:0002087,3.69e-18,115;CL:0000838,4.62e-18,52;CL:0000542,1.51e-17,53;CL:0000051,1.51e-17,53;CL:0002031,5.99e-14,120;CL:0000624,1.58e-10,6;CL:0000094,5.33e-08,8;CL:0000763,4.23e-07,108;CL:0000049,4.23e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000790;1.22e-25;18!CL:0000051;2.61e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-19!115;UBERON:0002390!2.19e-15!102;UBERON:0003061!2.19e-15!102;UBERON:0002193!5.74e-14!112;UBERON:0000178!1.09e-08!15;UBERON:0000179!1.09e-08!15;UBERON:0000463!1.09e-08!15;UBERON:0002405!9.06e-08!115;UBERON:0002371!2.40e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-13;15!UBERON:0000179;1.61e-13;15!UBERON:0000463;1.61e-13;15!UBERON:0002390;2.14e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.58e-13,15;UBERON:0000179,1.58e-13,15;UBERON:0000463,1.58e-13,15;UBERON:0002390,1.72e-08,98;UBERON:0003061,1.72e-08,98;UBERON:0002193,2.87e-08,108;UBERON:0007023,3.13e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,11.8009283054671,50.2816511507349,4.95411594611443,0,0,0,0,0,0,14.9578760303607,14.4392002178502,10.8505435357926,3.58264758783879,18.7858326291008,5.15151135268373,0.872389432677388,0.755751887377619,0.242584061187816,0.929716147622738,1.6446715520873,0.309706370895104,0.575384784644301,0.768482119587302,1.6553756092201,0.689491361473237,2.5819387343353,1.35426486594342,0.752969358170419,1.09162460023138,1.12361742222542,1.22433556948361,2.56743221660875,0.639337125799041,0.989553900560148,0.997318288108159,0.426224750532694,0.290209238628584,1.13477044938228,0,1.00499466102697,1.0429658368404,0,0.605399502633369,3.31449872388808,0.632924774881769,0,0,0,0,0,0,0.285012743741249,0,0,0,2.73069305631066,0,0.853460445133014,0,0.574752439954483,0,0,0.569212969109448,1.76171156811282,1.91136614062614,0,5.60508562981536,0,64.5208045973372,88.4274216185621,106.912779479745,181.898906985058,142.428030518879,165.233284201422,175.34405556712,214.687950417729,196.502140285716,196.057496706505,169.794022580665,246.447699152199,253.745787089322,234.81732777405,245.122465776048,155.914060125458,124.560713056131,123.068780921268,153.667219993316,164.865093624959,174.365324588874,205.832839844095,163.450721044599,193.369206494727,216.810790134187,276.581544934477,152.984320983017,176.365550170789,182.398860766425,179.950711553453,183.111543313393,105.440326706535,83.9762214760213,74.5845679996415,0,0,0,0,0,0,0,0,0,0,0.351339142772504,2.35762335895883,0,0,0.649094787309367,0.870648686496336,0.797747763113191,0.953962497221368,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,323.150988771524,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,72.1132582339054,73.9602581768144,47.2302373509474,0,0,0,0,0,1.49801404789436,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,50.8649344262303,33.8671295285228,43.7582986994122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,1.26664581178598,0,0,0,0,0,0,1.03558180854457,0,0,0,0,59.3713702801638,59.6417021571053,44.4324805995847,75.5194728201191,60.0588918705844,51.2293915842247,49.1428607886684,66.6225148087187,0,0,0,0,0,140.576282456466,174.890621183518,25.9453182862662,0,0.211673582723883,0,0,0,0,7.51903431270201,0,0,0,0,2.06103206853459,0,0,0,0,5.2897173040096,0,0,18.6520302078779,0,0,0.586032717087576,0,0.445773537109913,0,0,0.296964680832639,0,0,0.140669416410513,0,14.9971525546351,0,1.39473591775749,25.4181202288656,0,0,0,0,0,0,0,1.7755813014648,64.6604349336737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,1.23120413606075,0.113942055847001,0,0,0,1.27600463892768,0.183195186803725,0.533034776018635,286.141234948062,0.470940769185074,1.16348177330109,2.93274358802335,2.54881294613061,2.51732380463764,3.03605972358696,0.635746315921515,0,0,0,0,5.97157158647103,4.77670848318032,7.33236173920351,0,0,0,0.337005664903385,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,10.8891644443797,0,0.947798694427319,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,1.22308667769421,0,0,0,0,2.13375836274523,0,0,0.137041924646751,0.19871461170299,0.126621591911757,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0.393915911536118,0.247247575143499,0,0,0.169346664131569,0.795229689809303,0,0,0,0,0.2249738915515,0,0.182248669974074,0,1.26089131678717,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0.58620893471233,0,0,0,0,0,3.73755943986931,1.10043013569766,3.72815149812476,34.7316215268366,0,0,0,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,2.92290463259083,3.85308036908753,0.163565394255844,0,0,0,48.396949796893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.138314504928436,0,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0.163771917510097,0,0.135075169236789,0,0,0.0634158101939068,0,7.12735096914337,3.47347824872506,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0,0.131545547125698,0,0,1.02041020705668,0,0,1.82631744101899,0.431855182437243,0,1.00067161847319,0,0,0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| ||
|short_description=p1@CD3D | |||
}} | }} |
Latest revision as of 23:57, 15 September 2015
Short description: | p1@CD3D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD3D_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000529594_5end |
EntrezGene: | CD3D |
HGNC: | 1673 |
UniProt: | E9PMT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.09e-29 | 25 |
pro-T cell | 1.09e-29 | 25 |
mature alpha-beta T cell | 1.23e-25 | 18 |
alpha-beta T cell | 1.23e-25 | 18 |
immature T cell | 1.23e-25 | 18 |
mature T cell | 1.23e-25 | 18 |
immature alpha-beta T cell | 1.23e-25 | 18 |
hematopoietic stem cell | 1.22e-23 | 168 |
leukocyte | 1.82e-22 | 136 |
hematopoietic cell | 1.93e-21 | 177 |
hematopoietic oligopotent progenitor cell | 3.81e-21 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-21 | 161 |
CD8-positive, alpha-beta T cell | 1.38e-18 | 11 |
nongranular leukocyte | 3.69e-18 | 115 |
lymphoid lineage restricted progenitor cell | 4.62e-18 | 52 |
lymphocyte | 1.51e-17 | 53 |
common lymphoid progenitor | 1.51e-17 | 53 |
hematopoietic lineage restricted progenitor cell | 5.99e-14 | 120 |
CD4-positive, alpha-beta T cell | 1.58e-10 | 6 |
granulocyte | 5.33e-08 | 8 |
myeloid cell | 4.23e-07 | 108 |
common myeloid progenitor | 4.23e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.58e-13 | 15 |
haemolymphatic fluid | 1.58e-13 | 15 |
organism substance | 1.58e-13 | 15 |
hematopoietic system | 1.72e-08 | 98 |
blood island | 1.72e-08 | 98 |
hemolymphoid system | 2.87e-08 | 108 |
adult organism | 3.13e-07 | 114 |