FFCP PHASE1:Hg19::chr20:35374467..35374513,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:35374467..35374513,- to FFCP PHASE1:Hg19::chr20:35374467..35374513,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57446 | |EntrezGene=57446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14462 | |HGNC=14462 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UGV2,B7Z341 | |UniProt=Q9UGV2,B7Z341 | ||
|association_with_transcript=0bp_to_ENST00000349004,ENST00000359675,ENST00000480314,ENST00000540765,uc002xfw.2,uc002xfx.2,uc010zvq.1,uc010zvr.1_5end | |||
|cluster_id=chr20:35374467..35374513,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_NDRG3_5end | |||
|id=chr20:35374467..35374513,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.40e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.69e-33!82;UBERON:0005743!2.66e-32!86;UBERON:0000073!2.86e-32!94;UBERON:0001016!2.86e-32!94;UBERON:0000955!5.10e-31!69;UBERON:0006238!5.10e-31!69;UBERON:0001049!1.16e-29!57;UBERON:0005068!1.16e-29!57;UBERON:0006241!1.16e-29!57;UBERON:0007135!1.16e-29!57;UBERON:0004121!1.28e-28!169;UBERON:0000924!5.67e-28!173;UBERON:0006601!5.67e-28!173;UBERON:0002616!4.30e-27!59;UBERON:0000033!8.11e-27!123;UBERON:0000153!2.93e-26!129;UBERON:0007811!2.93e-26!129;UBERON:0003075!1.80e-23!86;UBERON:0007284!1.80e-23!86;UBERON:0007023!8.80e-23!115;UBERON:0002346!2.08e-22!90;UBERON:0002780!2.17e-22!41;UBERON:0001890!2.17e-22!41;UBERON:0006240!2.17e-22!41;UBERON:0003080!3.84e-22!42;UBERON:0001893!3.99e-18!34;UBERON:0003056!4.08e-18!61;UBERON:0002020!4.59e-18!34;UBERON:0003528!4.59e-18!34;UBERON:0002791!1.87e-17!33;UBERON:0001869!4.61e-17!32;UBERON:0000477!3.46e-15!286;UBERON:0002619!1.35e-14!22;UBERON:0000064!4.22e-14!219;UBERON:0004111!1.92e-13!241;UBERON:0001950!2.03e-13!20;UBERON:0000475!2.86e-13!365;UBERON:0000956!6.62e-13!25;UBERON:0000203!6.62e-13!25;UBERON:0000119!7.89e-13!312;UBERON:0000483!2.29e-12!309;UBERON:0000025!1.29e-11!194;UBERON:0000481!4.93e-11!347;UBERON:0003076!1.27e-08!15;UBERON:0003057!1.27e-08!15;UBERON:0000467!6.99e-08!625;UBERON:0000480!9.75e-08!626;UBERON:0004732!3.13e-07!13;UBERON:0004733!4.70e-07!12;UBERON:0002028!4.70e-07!12;UBERON:0007277!4.70e-07!12;UBERON:0002420!8.27e-07!9;UBERON:0007245!8.27e-07!9;UBERON:0010009!8.27e-07!9;UBERON:0010011!8.27e-07!9;UBERON:0000454!8.27e-07!9;UBERON:0000062!9.51e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.68e-16;53!UBERON:0002616;1.68e-16;53!UBERON:0002780;3.75e-16;41!UBERON:0001890;3.75e-16;41!UBERON:0001893;1.29e-15;34!UBERON:0003528;1.84e-15;34!UBERON:0002020;1.84e-15;34!UBERON:0001869;2.22e-15;32!UBERON:0002791;2.96e-15;32!UBERON:0002619;1.34e-14;22!UBERON:0000955;2.77e-14;68!UBERON:0001017;1.89e-13;75!UBERON:0001950;2.03e-13;20!UBERON:0000956;5.60e-13;25!UBERON:0000203;5.60e-13;25!UBERON:0001016;1.73e-12;83!UBERON:0004732;2.98e-07;13!UBERON:0004733;4.40e-07;12!UBERON:0002028;4.40e-07;12!UBERON:0002420;8.12e-07;9!UBERON:0007245;8.12e-07;9!UBERON:0010009;8.12e-07;9!UBERON:0010011;8.12e-07;9!UBERON:0000454;8.12e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.22e-33,81;UBERON:0001016,9.11e-33,89;UBERON:0000955,3.35e-31,68;UBERON:0006238,3.35e-31,68;UBERON:0001049,6.67e-30,56;UBERON:0005068,6.67e-30,56;UBERON:0006241,6.67e-30,56;UBERON:0007135,6.67e-30,56;UBERON:0000073,3.24e-28,53;UBERON:0002616,3.24e-28,53;UBERON:0004121,8.64e-28,171;UBERON:0000924,8.64e-28,171;UBERON:0006601,8.64e-28,171;UBERON:0010371,1.65e-24,104;UBERON:0011216,1.95e-24,223;UBERON:0003075,8.73e-24,82;UBERON:0007284,8.73e-24,82;UBERON:0002346,1.17e-22,86;UBERON:0002780,2.17e-22,41;UBERON:0001890,2.17e-22,41;UBERON:0003080,2.17e-22,41;UBERON:0006240,2.17e-22,41;UBERON:0007023,3.11e-22,114;UBERON:0003056,1.93e-18,61;UBERON:0001893,3.99e-18,34;UBERON:0003528,4.59e-18,34;UBERON:0002020,4.59e-18,34;UBERON:0001869,4.61e-17,32;UBERON:0010314,5.45e-17,132;UBERON:0002791,6.53e-17,32;UBERON:0002619,1.35e-14,22;UBERON:0004111,1.34e-13,240;UBERON:0001950,2.03e-13,20;UBERON:0000956,6.62e-13,25;UBERON:0000203,6.62e-13,25;UBERON:0000119,1.53e-12,309;UBERON:0000483,4.37e-12,306;UBERON:0000025,6.33e-12,192;UBERON:0003076,1.27e-08,15;UBERON:0003057,1.27e-08,15;UBERON:0004732,3.13e-07,13;UBERON:0004733,4.70e-07,12;UBERON:0002028,4.70e-07,12;UBERON:0007277,4.70e-07,12;UBERON:0002420,8.26e-07,9;UBERON:0007245,8.26e-07,9;UBERON:0010009,8.26e-07,9;UBERON:0010011,8.26e-07,9;UBERON:0000454,8.26e-07,9 | |||
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| ||
|short_description=p1@NDRG3 | |||
}} | }} |
Latest revision as of 23:56, 15 September 2015
Short description: | p1@NDRG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NDRG3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000349004, ENST00000359675, ENST00000480314, ENST00000540765, uc002xfw.2, uc002xfx.2, uc010zvq.1, uc010zvr.1_5end |
EntrezGene: | NDRG3 |
HGNC: | 14462 |
UniProt: | Q9UGV2B7Z341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data