FFCP PHASE1:Hg19::chr3:150264246..150264268,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:150264246..150264268,- to FFCP PHASE1:Hg19::chr3:150264246..150264268,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27230 | |EntrezGene=27230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |HGNC=10759 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUH5 | |UniProt=C9JUH5 | ||
|association_with_transcript=17bp_to_ENST00000491660_5end | |||
|cluster_id=chr3:150264246..150264268,- | |||
|description=CAGE_peak_3_at_SERP1_5end | |||
|id=chr3:150264246..150264268,- | |||
|ontology_enrichment_celltype=CL:0000359!7.94e-14!32;CL:0000192!1.17e-13!42;CL:0000514!1.17e-13!42;CL:0000548!8.29e-12!679;CL:0000004!8.29e-12!679;CL:0000255!8.29e-12!679;CL:0000012!2.92e-11!682;CL:0000680!5.16e-11!57;CL:0000056!5.16e-11!57;CL:0000355!5.16e-11!57;CL:0000187!1.05e-10!54;CL:0000393!4.79e-10!60;CL:0000211!4.79e-10!60;CL:0000055!1.79e-09!180;CL:0000183!4.82e-09!59;CL:0000144!4.88e-08!625;CL:0000220!9.31e-08!246;CL:0002321!1.13e-07!248;CL:0000048!7.94e-07!430;CL:0000723!9.20e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.97e-13;32!CL:0000192;9.82e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,7.94e-14,32;CL:0000192,4.80e-13,43;CL:0000514,4.80e-13,43;CL:0000680,1.36e-10,58;CL:0000056,1.36e-10,58;CL:0000355,1.36e-10,58;CL:0000187,2.81e-10,55;CL:0000393,1.15e-09,61;CL:0000211,1.15e-09,61;CL:0002321,1.67e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;9.82e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!6.22e-14!42;UBERON:0003509!6.22e-14!42;UBERON:0004572!6.22e-14!42;UBERON:0002100!2.29e-12!216;UBERON:0005256!1.20e-11!143;UBERON:0004573!4.93e-11!33;UBERON:0004571!4.93e-11!33;UBERON:0000486!1.50e-10!82;UBERON:0003104!6.30e-10!238;UBERON:0009142!6.30e-10!238;UBERON:0000490!6.40e-10!138;UBERON:0000926!7.25e-10!448;UBERON:0004120!7.25e-10!448;UBERON:0006603!7.25e-10!448;UBERON:0004290!2.58e-09!70;UBERON:0000914!8.47e-09!83;UBERON:0002329!8.47e-09!83;UBERON:0003077!8.47e-09!83;UBERON:0003059!8.47e-09!83;UBERON:0007282!8.47e-09!83;UBERON:0009618!8.47e-09!83;UBERON:0007285!8.47e-09!83;UBERON:0005911!1.61e-08!82;UBERON:0003914!1.99e-08!118;UBERON:0001134!2.14e-08!61;UBERON:0002036!2.14e-08!61;UBERON:0003082!2.14e-08!61;UBERON:0002385!1.00e-07!63;UBERON:0001015!1.00e-07!63;UBERON:0000383!1.00e-07!63;UBERON:0001981!1.23e-07!60;UBERON:0007500!1.23e-07!60;UBERON:0004537!1.23e-07!60;UBERON:0006965!1.23e-07!60;UBERON:0003929!6.74e-07!54;UBERON:0009569!7.82e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.99e-10;33!UBERON:0004571;7.99e-10;33!UBERON:0001637;8.24e-10;42!UBERON:0003509;8.24e-10;42!UBERON:0004572;8.24e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.22e-14,42;UBERON:0003509,6.22e-14,42;UBERON:0004572,6.22e-14,42;UBERON:0002100,3.50e-13,199;UBERON:0005256,4.09e-13,122;UBERON:0004573,4.93e-11,33;UBERON:0004571,4.93e-11,33;UBERON:0000490,1.13e-10,148;UBERON:0000486,3.14e-10,83;UBERON:0003104,4.40e-09,160;UBERON:0009142,4.40e-09,160;UBERON:0007524,5.30e-09,73;UBERON:0002329,5.43e-09,71;UBERON:0003059,5.43e-09,71;UBERON:0007282,5.43e-09,71;UBERON:0004290,5.43e-09,71;UBERON:0009618,5.43e-09,71;UBERON:0003077,8.94e-09,72;UBERON:0007285,8.94e-09,72;UBERON:0003914,1.19e-08,117;UBERON:0005911,1.61e-08,82;UBERON:0007503,4.09e-08,78;UBERON:0001134,4.54e-08,62;UBERON:0002036,4.54e-08,62;UBERON:0003082,4.54e-08,62;UBERON:0004119,1.13e-07,160;UBERON:0000925,1.13e-07,160;UBERON:0006595,1.13e-07,160;UBERON:0002385,1.99e-07,64;UBERON:0001015,1.99e-07,64;UBERON:0000383,1.99e-07,64;UBERON:0007500,2.78e-07,59;UBERON:0001981,2.78e-07,59;UBERON:0004537,2.78e-07,59;UBERON:0006965,2.78e-07,59;UBERON:0003929,6.74e-07,54;UBERON:0009569,6.90e-07,112;UBERON:0001007,9.50e-07,145;UBERON:0001555,9.50e-07,145;UBERON:0007026,9.50e-07,145 | |||
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| ||
|short_description=p3@SERP1 | |||
}} | }} |
Latest revision as of 23:50, 15 September 2015
Short description: | p3@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SERP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_ENST00000491660_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | C9JUH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.94e-14 | 32 |
smooth muscle cell | 4.80e-13 | 43 |
smooth muscle myoblast | 4.80e-13 | 43 |
muscle precursor cell | 1.36e-10 | 58 |
myoblast | 1.36e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-10 | 58 |
muscle cell | 2.81e-10 | 55 |
electrically responsive cell | 1.15e-09 | 61 |
electrically active cell | 1.15e-09 | 61 |
embryonic cell | 1.67e-07 | 250 |