FFCP PHASE1:Hg19::chr12:104531854..104531893,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:104531854..104531893,-
|short_description=p2@NFYB
|description=CAGE_peak_2_at_NFYB_5end
|association_with_transcript=-59bp_to_ENST00000551727,uc001tkk.1_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4801 | |EntrezGene=4801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7805 | |HGNC=7805 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000551727,uc001tkk.1_5end | |||
|cluster_id=chr12:104531854..104531893,- | |||
|description=CAGE_peak_2_at_NFYB_5end | |||
|id=chr12:104531854..104531893,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-19!94;UBERON:0001016!1.65e-19!94;UBERON:0001017!5.07e-19!82;UBERON:0005743!7.21e-19!86;UBERON:0000955!2.93e-15!69;UBERON:0006238!2.93e-15!69;UBERON:0007023!1.39e-14!115;UBERON:0001049!2.12e-14!57;UBERON:0005068!2.12e-14!57;UBERON:0006241!2.12e-14!57;UBERON:0007135!2.12e-14!57;UBERON:0002616!3.06e-13!59;UBERON:0003080!8.38e-13!42;UBERON:0002780!1.47e-12!41;UBERON:0001890!1.47e-12!41;UBERON:0006240!1.47e-12!41;UBERON:0001893!2.22e-11!34;UBERON:0002020!3.67e-11!34;UBERON:0003528!3.67e-11!34;UBERON:0002346!3.69e-11!90;UBERON:0002791!4.08e-11!33;UBERON:0001869!4.21e-11!32;UBERON:0000924!4.10e-10!173;UBERON:0006601!4.10e-10!173;UBERON:0003075!4.25e-10!86;UBERON:0007284!4.25e-10!86;UBERON:0004121!3.09e-09!169;UBERON:0002619!6.54e-09!22;UBERON:0000956!6.81e-09!25;UBERON:0000203!6.81e-09!25;UBERON:0001950!1.43e-08!20;UBERON:0003056!1.08e-07!61;UBERON:0000153!4.59e-07!129;UBERON:0007811!4.59e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.43e-10;32!UBERON:0002780;1.75e-09;41!UBERON:0001890;1.75e-09;41!UBERON:0002791;1.76e-09;32!UBERON:0001893;1.91e-09;34!UBERON:0003528;2.93e-09;34!UBERON:0002020;2.93e-09;34!UBERON:0000956;1.79e-08;25!UBERON:0000203;1.79e-08;25!UBERON:0002619;1.85e-08;22!UBERON:0000073;1.96e-08;53!UBERON:0002616;1.96e-08;53!UBERON:0001950;5.01e-08;20!UBERON:0000955;6.33e-08;68!UBERON:0001017;2.76e-07;75!UBERON:0001016;3.85e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.89e-19,89;UBERON:0001017,1.17e-18,81;UBERON:0000955,6.75e-15,68;UBERON:0006238,6.75e-15,68;UBERON:0007023,2.28e-14,114;UBERON:0001049,3.92e-14,56;UBERON:0005068,3.92e-14,56;UBERON:0006241,3.92e-14,56;UBERON:0007135,3.92e-14,56;UBERON:0000073,1.29e-13,53;UBERON:0002616,1.29e-13,53;UBERON:0002780,1.32e-12,41;UBERON:0001890,1.32e-12,41;UBERON:0003080,1.32e-12,41;UBERON:0006240,1.32e-12,41;UBERON:0001893,2.01e-11,34;UBERON:0003528,3.34e-11,34;UBERON:0002020,3.34e-11,34;UBERON:0001869,3.83e-11,32;UBERON:0002791,9.72e-11,32;UBERON:0002346,1.78e-10,86;UBERON:0004121,1.06e-09,171;UBERON:0000924,1.06e-09,171;UBERON:0006601,1.06e-09,171;UBERON:0003075,1.99e-09,82;UBERON:0007284,1.99e-09,82;UBERON:0011216,3.24e-09,223;UBERON:0002619,6.08e-09,22;UBERON:0000956,6.34e-09,25;UBERON:0000203,6.34e-09,25;UBERON:0001950,1.33e-08,20;UBERON:0003056,4.25e-08,61 | |||
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| ||
|short_description=p2@NFYB | |||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p2@NFYB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFYB_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENST00000551727, uc001tkk.1_5end |
EntrezGene: | NFYB |
HGNC: | 7805 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.89e-19 | 89 |
central nervous system | 1.17e-18 | 81 |
brain | 6.75e-15 | 68 |
future brain | 6.75e-15 | 68 |
adult organism | 2.28e-14 | 114 |
neural tube | 3.92e-14 | 56 |
neural rod | 3.92e-14 | 56 |
future spinal cord | 3.92e-14 | 56 |
neural keel | 3.92e-14 | 56 |
regional part of nervous system | 1.29e-13 | 53 |
regional part of brain | 1.29e-13 | 53 |
regional part of forebrain | 1.32e-12 | 41 |
forebrain | 1.32e-12 | 41 |
anterior neural tube | 1.32e-12 | 41 |
future forebrain | 1.32e-12 | 41 |
telencephalon | 2.01e-11 | 34 |
brain grey matter | 3.34e-11 | 34 |
gray matter | 3.34e-11 | 34 |
cerebral hemisphere | 3.83e-11 | 32 |
regional part of telencephalon | 9.72e-11 | 32 |
neurectoderm | 1.78e-10 | 86 |
ectoderm-derived structure | 1.06e-09 | 171 |
ectoderm | 1.06e-09 | 171 |
presumptive ectoderm | 1.06e-09 | 171 |
neural plate | 1.99e-09 | 82 |
presumptive neural plate | 1.99e-09 | 82 |
organ system subdivision | 3.24e-09 | 223 |
regional part of cerebral cortex | 6.08e-09 | 22 |
cerebral cortex | 6.34e-09 | 25 |
pallium | 6.34e-09 | 25 |
neocortex | 1.33e-08 | 20 |
pre-chordal neural plate | 4.25e-08 | 61 |