FFCP PHASE1:Hg19::chr10:103578162..103578173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10724 | |EntrezGene=10724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7056 | |HGNC=7056 | ||
|TSSclassifier=strong | |||
|UniProt=O60502 | |UniProt=O60502 | ||
|association_with_transcript=1bp_to_ENST00000357797,ENST00000361464,ENST00000370094_5end | |association_with_transcript=1bp_to_ENST00000357797,ENST00000361464,ENST00000370094_5end | ||
|cluster_id=chr10:103578162..103578173,- | |||
|description=CAGE_peak_2_at_MGEA5_5end | |description=CAGE_peak_2_at_MGEA5_5end | ||
|id=chr10:103578162..103578173,- | |id=chr10:103578162..103578173,- | ||
|ontology_enrichment_celltype=CL:0000838!6.56e-09!52;CL:0000542!7.67e-09!53;CL:0000051!7.67e-09!53;CL:0000791!2.89e-07!18;CL:0000789!2.89e-07!18;CL:0002420!2.89e-07!18;CL:0002419!2.89e-07!18;CL:0000790!2.89e-07!18 | |ontology_enrichment_celltype=CL:0000838!6.56e-09!52;CL:0000542!7.67e-09!53;CL:0000051!7.67e-09!53;CL:0000791!2.89e-07!18;CL:0000789!2.89e-07!18;CL:0002420!2.89e-07!18;CL:0002419!2.89e-07!18;CL:0000790!2.89e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.06e-07;18!CL:0000789;3.06e-07;18!CL:0002419;3.06e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-09,52;CL:0000542,2.73e-09,53;CL:0000051,2.73e-09,53;CL:0000791,2.33e-07,18;CL:0000789,2.33e-07,18;CL:0002420,2.33e-07,18;CL:0002419,2.33e-07,18;CL:0000790,2.33e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.06e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-18!115;UBERON:0001049!7.11e-12!57;UBERON:0005068!7.11e-12!57;UBERON:0006241!7.11e-12!57;UBERON:0007135!7.11e-12!57;UBERON:0003080!1.00e-11!42;UBERON:0000955!1.43e-11!69;UBERON:0006238!1.43e-11!69;UBERON:0002616!1.48e-11!59;UBERON:0002780!1.62e-11!41;UBERON:0001890!1.62e-11!41;UBERON:0006240!1.62e-11!41;UBERON:0001869!4.09e-10!32;UBERON:0001893!6.59e-10!34;UBERON:0002020!1.10e-09!34;UBERON:0003528!1.10e-09!34;UBERON:0002791!1.96e-09!33;UBERON:0001017!7.54e-09!82;UBERON:0000178!8.88e-09!15;UBERON:0000179!8.88e-09!15;UBERON:0000463!8.88e-09!15;UBERON:0003075!1.23e-08!86;UBERON:0007284!1.23e-08!86;UBERON:0002619!1.67e-08!22;UBERON:0002346!4.14e-08!90;UBERON:0000153!5.27e-08!129;UBERON:0007811!5.27e-08!129;UBERON:0005743!5.50e-08!86;UBERON:0000956!1.43e-07!25;UBERON:0000203!1.43e-07!25;UBERON:0003056!1.73e-07!61;UBERON:0001950!2.41e-07!20;UBERON:0000033!5.92e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.62e-09;22!UBERON:0001869;7.70e-09;32!UBERON:0000178;8.96e-09;15!UBERON:0000179;8.96e-09;15!UBERON:0000463;8.96e-09;15!UBERON:0003528;1.00e-08;34!UBERON:0002020;1.00e-08;34!UBERON:0001893;1.50e-08;34!UBERON:0002780;1.67e-08;41!UBERON:0001890;1.67e-08;41!UBERON:0002791;3.16e-08;32!UBERON:0000073;1.16e-07;53!UBERON:0002616;1.16e-07;53!UBERON:0000956;1.23e-07;25!UBERON:0000203;1.23e-07;25!UBERON:0001950;1.30e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.29e-18,114;UBERON:0001049,8.26e-12,56;UBERON:0005068,8.26e-12,56;UBERON:0006241,8.26e-12,56;UBERON:0007135,8.26e-12,56;UBERON:0002780,1.11e-11,41;UBERON:0001890,1.11e-11,41;UBERON:0003080,1.11e-11,41;UBERON:0006240,1.11e-11,41;UBERON:0000073,1.47e-11,53;UBERON:0002616,1.47e-11,53;UBERON:0000955,2.04e-11,68;UBERON:0006238,2.04e-11,68;UBERON:0001869,2.96e-10,32;UBERON:0001893,4.81e-10,34;UBERON:0003528,8.11e-10,34;UBERON:0002020,8.11e-10,34;UBERON:0002791,1.78e-09,32;UBERON:0003075,6.07e-09,82;UBERON:0007284,6.07e-09,82;UBERON:0000178,6.76e-09,15;UBERON:0000179,6.76e-09,15;UBERON:0000463,6.76e-09,15;UBERON:0001017,8.42e-09,81;UBERON:0002619,1.28e-08,22;UBERON:0002346,2.67e-08,86;UBERON:0003056,4.50e-08,61;UBERON:0010314,8.84e-08,132;UBERON:0000956,1.14e-07,25;UBERON:0000203,1.14e-07,25;UBERON:0001950,1.94e-07,20;UBERON:0001016,2.46e-07,89 | |||
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| ||
|short_description=p2@MGEA5 | |short_description=p2@MGEA5 | ||
}} | }} |
Latest revision as of 23:32, 15 September 2015
Short description: | p2@MGEA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MGEA5_5end |
Coexpression cluster: | NA |
Association with transcript: | 1bp_to_ENST00000357797, ENST00000361464, ENST00000370094_5end |
EntrezGene: | MGEA5 |
HGNC: | 7056 |
UniProt: | O60502 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.30e-09 | 52 |
lymphocyte | 2.73e-09 | 53 |
common lymphoid progenitor | 2.73e-09 | 53 |
mature alpha-beta T cell | 2.33e-07 | 18 |
alpha-beta T cell | 2.33e-07 | 18 |
immature T cell | 2.33e-07 | 18 |
mature T cell | 2.33e-07 | 18 |
immature alpha-beta T cell | 2.33e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.29e-18 | 114 |
neural tube | 8.26e-12 | 56 |
neural rod | 8.26e-12 | 56 |
future spinal cord | 8.26e-12 | 56 |
neural keel | 8.26e-12 | 56 |
regional part of forebrain | 1.11e-11 | 41 |
forebrain | 1.11e-11 | 41 |
anterior neural tube | 1.11e-11 | 41 |
future forebrain | 1.11e-11 | 41 |
regional part of nervous system | 1.47e-11 | 53 |
regional part of brain | 1.47e-11 | 53 |
brain | 2.04e-11 | 68 |
future brain | 2.04e-11 | 68 |
cerebral hemisphere | 2.96e-10 | 32 |
telencephalon | 4.81e-10 | 34 |
brain grey matter | 8.11e-10 | 34 |
gray matter | 8.11e-10 | 34 |
regional part of telencephalon | 1.78e-09 | 32 |
neural plate | 6.07e-09 | 82 |
presumptive neural plate | 6.07e-09 | 82 |
blood | 6.76e-09 | 15 |
haemolymphatic fluid | 6.76e-09 | 15 |
organism substance | 6.76e-09 | 15 |
central nervous system | 8.42e-09 | 81 |
regional part of cerebral cortex | 1.28e-08 | 22 |
neurectoderm | 2.67e-08 | 86 |
pre-chordal neural plate | 4.50e-08 | 61 |
structure with developmental contribution from neural crest | 8.84e-08 | 132 |
cerebral cortex | 1.14e-07 | 25 |
pallium | 1.14e-07 | 25 |
neocortex | 1.94e-07 | 20 |
nervous system | 2.46e-07 | 89 |