FFCP PHASE2:Hg19::chr17:48262782..48262783,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:1277 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:2197 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=2197 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P02452 | ||
|association_with_transcript=117bp_to_J00113_5end | |association_with_transcript=117bp_to_J00113_5end | ||
|cluster_id=chr17:48262782..48262783,- | |cluster_id=chr17:48262782..48262783,- |
Latest revision as of 23:31, 15 September 2015
Short description: | p55@COL1A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_55_at_COL1A1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 117bp_to_J00113_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | P02452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p55@COL1A1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.41e-12 | 76 |
preadipocyte | 1.66e-11 | 12 |
fibrocyte | 4.16e-10 | 3 |
tendon cell | 4.16e-10 | 3 |
preadipocyte of the breast | 5.81e-10 | 3 |
omentum preadipocyte | 6.97e-10 | 3 |
adipocyte of omentum tissue | 1.09e-09 | 3 |
receptor cell | 7.20e-09 | 6 |
sensory epithelial cell | 7.20e-09 | 6 |
olfactory epithelial cell | 7.20e-09 | 6 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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omentum | 7.36e-18 | 6 |
peritoneum | 7.36e-18 | 6 |
abdominal cavity | 7.36e-18 | 6 |
visceral peritoneum | 7.36e-18 | 6 |
cavity lining | 1.53e-11 | 12 |
serous membrane | 1.53e-11 | 12 |
integument | 3.37e-11 | 46 |
integumental system | 3.37e-11 | 46 |
dense regular connective tissue | 4.16e-10 | 3 |
tendon | 4.16e-10 | 3 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
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musculoskeletal system disease | 5.10e-10 | 5 |
myotonic disease | 5.10e-10 | 5 |
muscle tissue disease | 5.10e-10 | 5 |
myopathy | 5.10e-10 | 5 |
muscular disease | 5.10e-10 | 5 |
myotonic dystrophy | 5.10e-10 | 5 |
Showing 1 to 6 of 6 entries