FFCP PHASE1:Hg19::chr2:234601580..234601585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54578 | |EntrezGene=54578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12538 | |HGNC=12538 | ||
|TSSclassifier=strong | |||
|UniProt=P19224,Q5DSZ8 | |UniProt=P19224,Q5DSZ8 | ||
|association_with_transcript=68bp_to_ENST00000305139,NM_001072,uc002vuv.3,uc010zmy.1_5end | |association_with_transcript=68bp_to_ENST00000305139,NM_001072,uc002vuv.3,uc010zmy.1_5end | ||
|cluster_id=chr2:234601580..234601585,+ | |||
|coexpression_cluster_id=C1504 | |||
|description=CAGE_peak_7_at_UGT1A6_5end | |description=CAGE_peak_7_at_UGT1A6_5end | ||
|id=chr2:234601580..234601585,+ | |id=chr2:234601580..234601585,+ | ||
|ontology_enrichment_celltype=CL:0000223!2.29e-14!59;CL:0002076!1.40e-09!43;CL:0000066!1.60e-09!254;CL:0002231!8.69e-09!3;CL:0000181!2.49e-08!12;CL:0000417!2.49e-08!12;CL:0000668!2.49e-08!12;CL:0000414!2.49e-08!12;CL:0000412!2.49e-08!12;CL:0000182!2.49e-08!12;CL:0000313!1.74e-07!1;CL:0002563!7.00e-07!4;CL:0002251!9.25e-07!21 | |ontology_enrichment_celltype=CL:0000223!2.29e-14!59;CL:0002076!1.40e-09!43;CL:0000066!1.60e-09!254;CL:0002231!8.69e-09!3;CL:0000181!2.49e-08!12;CL:0000417!2.49e-08!12;CL:0000668!2.49e-08!12;CL:0000414!2.49e-08!12;CL:0000412!2.49e-08!12;CL:0000182!2.49e-08!12;CL:0000313!1.74e-07!1;CL:0002563!7.00e-07!4;CL:0002251!9.25e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0000313;7.72e-21;1!CL:0000159;4.09e-11;2!CL:0000182;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.43e-21,1;CL:0000159,4.52e-11,2;CL:0000182,1.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;1.85e-14;13!UBERON:0004161;3.43e-08;11 | |||
|ontology_enrichment_disease=DOID:305!1.51e-12!106;DOID:299!5.26e-11!25;DOID:0050687!1.20e-09!143;DOID:2152!1.74e-07!1 | |ontology_enrichment_disease=DOID:305!1.51e-12!106;DOID:299!5.26e-11!25;DOID:0050687!1.20e-09!143;DOID:2152!1.74e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:2152;7.72e-21;1!DOID:3493;2.02e-11;2!DOID:299;7.84e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,9.43e-21,1;DOID:3493,2.02e-11,2;DOID:299,8.03e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0003929!1.19e-13!54;UBERON:0005911!3.44e-13!82;UBERON:0009497!3.49e-11!25;UBERON:0000015!3.49e-11!25;UBERON:0002423!3.49e-11!25;UBERON:0006235!3.49e-11!25;UBERON:0004161!3.49e-11!25;UBERON:0001007!1.27e-09!155;UBERON:0001555!1.27e-09!155;UBERON:0007026!1.27e-09!155;UBERON:0004119!1.28e-09!169;UBERON:0000925!1.28e-09!169;UBERON:0006595!1.28e-09!169;UBERON:0008835!1.47e-09!22;UBERON:0003894!1.47e-09!22;UBERON:0004921!1.51e-09!129;UBERON:0004185!1.51e-09!129;UBERON:0009854!4.06e-09!23;UBERON:0007499!2.44e-08!25;UBERON:0000077!2.72e-08!130;UBERON:0009856!5.38e-08!26;UBERON:0002107!6.96e-08!19;UBERON:0006925!6.96e-08!19;UBERON:0008836!6.96e-08!19;UBERON:0004911!1.74e-07!1;UBERON:0005172!1.87e-07!55;UBERON:0005173!1.87e-07!55;UBERON:0001242!7.00e-07!4;UBERON:0001262!7.00e-07!4;UBERON:0004786!7.00e-07!4;UBERON:0004808!7.00e-07!4;UBERON:0001277!7.00e-07!4;UBERON:0005177!8.11e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;7.72e-21;1!UBERON:0002423;4.49e-13;25!UBERON:0004909;4.09e-11;2!UBERON:0002107;5.10e-10;19!UBERON:0006925;5.10e-10;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,9.43e-21,1;UBERON:0008835,7.98e-15,22;UBERON:0003894,7.98e-15,22;UBERON:0009854,3.38e-14,23;UBERON:0007499,4.29e-13,25;UBERON:0009497,4.29e-13,25;UBERON:0000015,4.29e-13,25;UBERON:0002423,4.29e-13,25;UBERON:0006235,4.29e-13,25;UBERON:0004161,4.29e-13,25;UBERON:0009856,1.32e-12,26;UBERON:0004909,4.52e-11,2;UBERON:0002107,4.87e-10,19;UBERON:0006925,4.87e-10,19;UBERON:0008836,4.87e-10,19;UBERON:0003929,2.67e-09,54 | |||
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|short_description=p7@UGT1A6 | |short_description=p7@UGT1A6 | ||
}} | }} |
Latest revision as of 23:31, 15 September 2015
Short description: | p7@UGT1A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_UGT1A6_5end |
Coexpression cluster: | C1504_signet_endometrial_bile_hepatoma_kidney_mesothelioma_liver |
Association with transcript: | 68bp_to_ENST00000305139, NM_001072, uc002vuv.3, uc010zmy.1_5end |
EntrezGene: | UGT1A6 |
HGNC: | 12538 |
UniProt: | P19224Q5DSZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.43e-21 | 1 |
seromucus secreting cell | 4.52e-11 | 2 |
hepatocyte | 1.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 9.43e-21 | 1 |
hepatic diverticulum | 7.98e-15 | 22 |
liver primordium | 7.98e-15 | 22 |
digestive tract diverticulum | 3.38e-14 | 23 |
epithelial sac | 4.29e-13 | 25 |
epithelium of foregut-midgut junction | 4.29e-13 | 25 |
anatomical boundary | 4.29e-13 | 25 |
hepatobiliary system | 4.29e-13 | 25 |
foregut-midgut junction | 4.29e-13 | 25 |
septum transversum | 4.29e-13 | 25 |
sac | 1.32e-12 | 26 |
epithelium of gonad | 4.52e-11 | 2 |
liver | 4.87e-10 | 19 |
digestive gland | 4.87e-10 | 19 |
liver bud | 4.87e-10 | 19 |
gut epithelium | 2.67e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 9.43e-21 | 1 |
signet ring cell adenocarcinoma | 2.02e-11 | 2 |
adenocarcinoma | 8.03e-08 | 25 |